Entamoeba dispar: EDI_351390
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Entry
EDI_351390 CDS
T01083
Name
(RefSeq) exosome complex exonuclease RRP41
KO
K11600
exosome complex component RRP41
Organism
edi
Entamoeba dispar
Pathway
edi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
edi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EDI_351390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
edi03019
]
EDI_351390
Messenger RNA biogenesis [BR:
edi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
EDI_351390
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
EDI_351390
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PRDM2_PR
Barwin
Motif
Other DBs
NCBI-GeneID:
5885797
NCBI-ProteinID:
XP_001740629
UniProt:
B0ERA1
LinkDB
All DBs
AA seq
238 aa
AA seq
DB search
MEYISPEGYRLDGRRTTEMRKCEMEINFLNTSDGSARVRMGNTIVEAVVFGPLEGRRRNR
EGAELMVSYSQATFATRKRREQMHDRTMIETAELLKQMYEQVIITKLLPETMIDLRVQIM
QDDGSVTAAVINACTLALIDAGIPMIDIVSAAEGGYIDGKMVVDMNKDEENVGTVFNVHT
AIMQKSGAVALLQTEGKMPLQRLGDLLSIVEEGAKTIGIEMKKRIREYGIEVLSYQTI
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggaatatatttctccagaaggatatcgtcttgatggaagaagaacaacagaaatgaga
aaatgtgaaatggaaattaattttttaaacacaagtgatggatctgcaagagtaagaatg
ggaaatactattgttgaagcagttgtatttggtccattagaaggaagaagaagaaataga
gaaggagctgaacttatggtatcatattcacaagctacatttgcaacaagaaaaagaaga
gaacaaatgcatgatagaacaatgattgaaacagcagaattattaaaacaaatgtatgaa
caagttataattacaaaacttcttccagaaactatgattgatttaagagtacaaattatg
caagatgatggtagtgttacagcagctgtaattaatgcatgtacattagcattaattgat
gctggaataccaatgattgatattgtatcagcagcagaaggaggatatattgatggaaaa
atggtagttgatatgaataaagatgaagagaatgttggaacagtatttaatgttcataca
gctattatgcaaaaaagtggtgctgtagcattacttcaaacagaaggaaaaatgccatta
caaagattaggagatttattatctatagtagaagaaggagcaaaaacaataggaattgaa
atgaagaaaagaattagagaatatggtattgaagtattatcatatcaaactatttaa
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