Entamoeba dispar: EDI_351410
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Entry
EDI_351410 CDS
T01083
Name
(RefSeq) WD repeat-containing protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
edi
Entamoeba dispar
Pathway
edi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
edi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EDI_351410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
edi03041
]
EDI_351410
Spliceosome [BR:
edi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
EDI_351410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_WDR75_1st
NBCH_WD40
PRP4
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_SPT8
PEP5_VPS11_N
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_Nup120_160
WDR54
Beta-prop_DCAF12
Beta-prop_NOL10_N
Beta-prop_WDR35_TULP_N
WD_LRWD1
Beta-prop_RIG_1st
Beta-prop_BBS7
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
5885799
NCBI-ProteinID:
XP_001740631
UniProt:
B0ERA3
LinkDB
All DBs
AA seq
426 aa
AA seq
DB search
MKNIPTTQQYVENIKKLEEKWKYRKIPLPTEDKMVMLRLRELGEPIMLFGEEFESRRERL
RDALAKVGSDQGFPQCALTEEKIDQLITKLHYTDGGEELIGIRRWLLVDSLLRAKSRIQE
EVHYVKHKYELIHNVGSMIGDEYRVLRCKVGRKNVITGGADGKVRVWDLSDCSKTRETNV
EGQIYSLNFSPIEEAPIDFVVGTSQGYVKLFAKNEEKPLGIQSHTDRVNAVEFHQSGRFL
LTGSHDSMIKLWDLENGGCVLKQTGHSGSVRCIGWQRDGGIFASGGNDCIVHLFDIRNGK
QIGKYKGHSSTITSLDWHCNGGVLITASDDNTVKLWDIRMERCGYTIPAHNTIVTSVKLN
HQGDFLLTSSFDHSIKLWSLKNWNWKLIWKYEEHSKPVVDVDWLEDDEGFISCSFDKTWK
IYKIEE
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacattcctacaactcaacaatatgtagaaaatattaagaaattagaagaaaaa
tggaaatatagaaaaattccacttcctacagaagataaaatggttatgttaagattgaga
gaacttggagaaccaattatgttatttggagaagaatttgagagtcgaagagagagatta
agagatgcattagctaaagttggttctgatcaaggatttccacaatgtgcacttacagaa
gaaaaaatagatcaattaataactaaattacattacactgatggtggagaagaattaatt
ggaataagaagatggttattagttgatagtttacttagggctaaatcaagaattcaagaa
gaagttcattatgttaaacataaatatgaattaatacataatgttggttcaatgattgga
gatgaatatagagttttacgatgtaaagtaggaagaaaaaatgttattacagggggtgca
gatgggaaagtaagagtatgggatttaagtgattgttcaaaaacaagagaaacaaatgtt
gaaggacaaatttattcattaaatttttcacctattgaggaagcaccaattgattttgtt
gtaggaacatcacaaggatatgttaaattatttgcaaagaatgaagaaaaaccacttggt
attcaaagtcatacagatagagtgaatgcagtagagtttcatcaatcaggaagattttta
ttaacaggatctcatgattcaatgataaaattatgggatttagagaatggagggtgtgta
ttaaaacaaactggacatagtggatcagtaagatgtattggatggcaaagagatggtgga
atatttgcatcaggaggaaatgattgtattgttcatttatttgatattcgaaatggtaaa
caaataggaaagtataaaggtcattcatcaacaataactagtttagattggcattgtaat
ggaggagtattaattacagcatctgatgataatactgtaaaattatgggatattcgaatg
gaaagatgtggatatactattccagcacataatactattgttacatcagtaaaattaaat
catcaaggagatttcttactaacaagtagttttgatcattctattaaactttggtcatta
aaaaattggaattggaaattaatatggaaatatgaagaacattcaaaaccagttgtagat
gtagattggttagaagatgatgaaggatttatttcatgtagttttgataaaacatggaaa
atatataagattgaagaatga
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