KEGG   Entamoeba dispar: EDI_351410
Entry
EDI_351410        CDS       T01083                                 
Name
(RefSeq) WD repeat-containing protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
edi  Entamoeba dispar
Pathway
edi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:edi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    EDI_351410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:edi03041]
    EDI_351410
Spliceosome [BR:edi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    EDI_351410
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 EIF3I Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_CAF1B_HIR1 Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_WDR75_1st NBCH_WD40 PRP4 WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_SPT8 PEP5_VPS11_N WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_Nup120_160 WDR54 Beta-prop_DCAF12 Beta-prop_NOL10_N Beta-prop_WDR35_TULP_N WD_LRWD1 Beta-prop_RIG_1st Beta-prop_BBS7 Beta-prop_VPS8
Other DBs
NCBI-GeneID: 5885799
NCBI-ProteinID: XP_001740631
UniProt: B0ERA3
LinkDB
AA seq 426 aa
MKNIPTTQQYVENIKKLEEKWKYRKIPLPTEDKMVMLRLRELGEPIMLFGEEFESRRERL
RDALAKVGSDQGFPQCALTEEKIDQLITKLHYTDGGEELIGIRRWLLVDSLLRAKSRIQE
EVHYVKHKYELIHNVGSMIGDEYRVLRCKVGRKNVITGGADGKVRVWDLSDCSKTRETNV
EGQIYSLNFSPIEEAPIDFVVGTSQGYVKLFAKNEEKPLGIQSHTDRVNAVEFHQSGRFL
LTGSHDSMIKLWDLENGGCVLKQTGHSGSVRCIGWQRDGGIFASGGNDCIVHLFDIRNGK
QIGKYKGHSSTITSLDWHCNGGVLITASDDNTVKLWDIRMERCGYTIPAHNTIVTSVKLN
HQGDFLLTSSFDHSIKLWSLKNWNWKLIWKYEEHSKPVVDVDWLEDDEGFISCSFDKTWK
IYKIEE
NT seq 1281 nt   +upstreamnt  +downstreamnt
atgaaaaacattcctacaactcaacaatatgtagaaaatattaagaaattagaagaaaaa
tggaaatatagaaaaattccacttcctacagaagataaaatggttatgttaagattgaga
gaacttggagaaccaattatgttatttggagaagaatttgagagtcgaagagagagatta
agagatgcattagctaaagttggttctgatcaaggatttccacaatgtgcacttacagaa
gaaaaaatagatcaattaataactaaattacattacactgatggtggagaagaattaatt
ggaataagaagatggttattagttgatagtttacttagggctaaatcaagaattcaagaa
gaagttcattatgttaaacataaatatgaattaatacataatgttggttcaatgattgga
gatgaatatagagttttacgatgtaaagtaggaagaaaaaatgttattacagggggtgca
gatgggaaagtaagagtatgggatttaagtgattgttcaaaaacaagagaaacaaatgtt
gaaggacaaatttattcattaaatttttcacctattgaggaagcaccaattgattttgtt
gtaggaacatcacaaggatatgttaaattatttgcaaagaatgaagaaaaaccacttggt
attcaaagtcatacagatagagtgaatgcagtagagtttcatcaatcaggaagattttta
ttaacaggatctcatgattcaatgataaaattatgggatttagagaatggagggtgtgta
ttaaaacaaactggacatagtggatcagtaagatgtattggatggcaaagagatggtgga
atatttgcatcaggaggaaatgattgtattgttcatttatttgatattcgaaatggtaaa
caaataggaaagtataaaggtcattcatcaacaataactagtttagattggcattgtaat
ggaggagtattaattacagcatctgatgataatactgtaaaattatgggatattcgaatg
gaaagatgtggatatactattccagcacataatactattgttacatcagtaaaattaaat
catcaaggagatttcttactaacaagtagttttgatcattctattaaactttggtcatta
aaaaattggaattggaaattaatatggaaatatgaagaacattcaaaaccagttgtagat
gtagattggttagaagatgatgaaggatttatttcatgtagttttgataaaacatggaaa
atatataagattgaagaatga

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