Escherichia coli DH1: ECDH1ME8569_0257
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Entry
ECDH1ME8569_0257 CDS
T02102
Symbol
yagF
Name
(GenBank) CP4-6 prophage; predicted dehydratase
KO
K22396
xylonate dehydratase [EC:
4.2.1.82
]
Organism
edj
Escherichia coli DH1
Pathway
edj00040
Pentose and glucuronate interconversions
edj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
edj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
ECDH1ME8569_0257 (yagF)
Enzymes [BR:
edj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.82 xylonate dehydratase
ECDH1ME8569_0257 (yagF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
Motif
Other DBs
NCBI-ProteinID:
BAJ42113
LinkDB
All DBs
Position
282426..284393
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AA seq
655 aa
AA seq
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MTIEKIFTPQDDAFYAVITHAAGPQGALPLTPQMLMESPSGNLFGITQNAGMGWDANKLT
GKEVLIIGTQGGIRAGDGRPIALGYHTGHWEIGMQMQAAAKEITRNGGIPFAAFVSDPCD
GRSQGTHGMFDSLPYRNDAAIVFRRLIRSLPTRRAVIGVATCDKGLPATMIALAAMHDLP
TILVPGGATLPPTVGEDAGKVQTIGARFANHELSLQEAAELGCRACASPGGGCQFLGTAG
TSQVVAEALGLALPHSALAPSGQAVWLEIARQSARAVSELDSRGITTRDILSDKAIENAM
VIHAAFGGSTNLLLHIPAIAHAAGCTIPDVEHWTRINRKVPRLVSVLPNGPDYHPTVRAF
LAGGVPEVMLHLRDLGLLHLDAMTVTGQTVGENLEWWQASERRARFRQCLREQDGVEPDD
VILPPEKAKAKGLTSTVCFPTGNIAPEGSVIKATAIDPSVVGEDGVYHHTGRVRVFVSEA
QAIKAIKREEIVQGDIMVVIGGGPSGTGMEETYQLTSALKHISWGKTVSLITDARFSGVS
TGACFGHVSPEALAGGPIGKLRDNDIIEIAVDRLTLTGSVNFIGTADNPLTPEEGARELA
RRQTHPDLHAHDFLPDDTRLWAALQSVSGGTWKGCIYDTDKIIEVINAGKKALGI
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgaccattgagaaaattttcaccccgcaggacgacgcgttttatgcggtgatcacccac
gcggcggggccgcagggcgctctgccgctgaccccgcagatgctgatggaatctcccagc
ggcaacctgttcggcataacgcagaacgccgggatgggctgggacgccaacaagctcacc
ggcaaagaggtgctgattatcggcactcagggcggcatccgcgccggagacggacgccca
atcgcgctgggctaccacaccgggcattgggagatcggcatgcagatgcaggcggcggcg
aaggagatcacccgcaatggcgggatcccgttcgcggccttcgtcagcgatccgtgcgac
gggcgctcgcagggcacgcacggtatgttcgattccctgccgtaccgcaacgacgcggcg
atcgtgtttcgccgcctgatccgctccctgccgacgcggcgggcggtgatcggcgtagcg
acctgcgataaagggctgcccgccaccatgattgcgctggccgcgatgcacgacctgccg
actattctggtgccgggcggggcgacgctgccgccgaccgtcggggaagacgcgggcaag
gtgcagaccatcggcgcgcgtttcgccaaccacgaactctccctgcaggaggccgccgaa
ctgggctgtcgcgcctgcgcctcgccgggcggcgggtgtcagttcctcggcacggcgggc
acctcgcaggtggtcgcggaggcgctgggtctggcgctgccgcactccgcgctggcgccg
tccgggcaggcggtgtggctggagatcgcccgccagtcggcgcgcgcggtcagcgagctg
gatagccgcggcatcaccacgcgggatatcctctccgataaagccatcgaaaacgcgatg
gtgatccacgcggcgttcggcggctccaccaatttactgctgcacattccggccatcgcc
cacgcggcgggctgcacgatcccggacgttgagcactggacgcgcatcaaccgtaaagtg
ccgcgtctggtgagcgtgctgcccaacggcccggactatcacccgaccgtgcgcgccttc
ctcgcgggcggcgtgccggaggtgatgctccacctgcgcgacctcggcctgctgcatctg
gacgccatgaccgtgaccggccagacggtgggcgagaaccttgaatggtggcaggcgtcc
gagcgccgggcgcgcttccgccagtgcctgcgcgagcaggacggcgtagagccggatgac
gtgatcctgccgccggagaaggcaaaagcgaaagggctgacctcgacggtctgcttcccg
acgggcaacatcgcgccggaaggttcggtgatcaaggccacggcgatcgacccgtcggtg
gtgggcgaagatggcgtataccaccacaccggccgggtgcgggtgtttgtctcggaagcg
caggcgatcaaggcgatcaagcgggaagagattgtgcagggcgatatcatggtggtgatc
ggcggcgggccgtccggcaccggcatggaagagacctaccagctcacctccgcgctaaag
catatctcgtggggcaagacggtgtcgctcatcaccgatgcgcgcttctcgggcgtgtcg
acgggcgcctgcttcggccacgtgtcgccggaggcgctggcgggcgggccgattggcaag
ctgcgcgataacgacatcatcgagattgccgtggatcgtctgacgttaactggcagcgtg
aacttcatcggcaccgcggacaacccgctgacgccggaagagggcgcgcgcgagctggcg
cggcggcagacgcacccggacctgcacgcccacgactttttgccggacgacacccggctg
tgggcggcactgcagtcggtgagcggcggcacctggaaaggctgtatttatgacaccgat
aaaattatcgaggtaattaacgccggtaaaaaagcgctcggaatttaa
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