Escherichia coli DH1: ECDH1ME8569_0977
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Entry
ECDH1ME8569_0977 CDS
T02102
Symbol
ycdQ
Name
(GenBank) predicted glycosyl transferase
KO
K11936
poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
Organism
edj
Escherichia coli DH1
Pathway
edj00543
Exopolysaccharide biosynthesis
edj02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
edj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00543 Exopolysaccharide biosynthesis
ECDH1ME8569_0977 (ycdQ)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
ECDH1ME8569_0977 (ycdQ)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
edj01003
]
ECDH1ME8569_0977 (ycdQ)
Glycosyltransferases [BR:
edj01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
ECDH1ME8569_0977 (ycdQ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
Glyco_tranf_2_3
Glyco_trans_2_3
Glyco_transf_21
Glyco_tranf_2_2
Chitin_synth_2
Cellulose_synt
Glyco_tranf_2_4
Motif
Other DBs
NCBI-ProteinID:
BAJ42833
LinkDB
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Position
complement(1076849..1078174)
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AA seq
441 aa
AA seq
DB search
MINRIVSFFILCLVLCIPLCVAYFHSGELMMRFVFFWPFFMSIMWIVGGVYFWVYRERHW
PWGENAPAPQLKDNPSISIIIPCFNEEKNVEETIHAALAQRYENIEVIAVNDGSTDKTRA
ILDRMAAQIPHLRVIHLAQNQGKAIALKTGAAAAKSEYLVCIDGDALLDRDAAAYIVEPM
LYNPRVGAVTGNPRIRTRSTLVGKIQVGEYSSIIGLIKRTQRIYGNVFTVSGVIAAFRRS
ALAEVGYWSDDMITEDIDISWKLQLNQWTIFYEPRALCWILMPETLKGLWKQRLRWAQGG
AEVFLKNMTRLWRKENFRMWPLFFEYCLTTIWAFTCLVGFIIYAVQLAGVPLNIELTHIA
ATHTAGILLCTLCLLQFIVSLMIENRYEHNLTSSLFWIIWFPVIFWMLSLATTLVSFTRV
MLMPKKQRARWVSPDRGILRG
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgattaatcgcatcgtatcgttttttatattatgtctggtgttatgcatacccctatgc
gtagcgtactttcactctggtgaactgatgatgaggttcgttttcttctggccgtttttt
atgtccattatgtggattgttggcggcgtctatttctgggtctatcgtgaacgccactgg
ccgtggggagaaaacgcaccagctccccagttgaaagataatccgtctatctccattatc
attccctgttttaatgaggagaaaaacgttgaggaaaccatacacgccgctttagcacag
cgttatgagaacattgaagttattgccgtaaatgacggttcaacagataaaacccgtgcc
atcctggatcgcatggctgcacaaattccccatttgcgggtcattcatctggcgcaaaac
caggggaaagccattgcgcttaaaaccggagctgccgcggcgaaaagtgaatatctggtg
tgcattgatggcgatgcgttattagaccgcgatgcggcggcatatattgtggaaccgatg
ttgtacaacccgcgtgtgggtgccgtaaccggtaatcctcgtattcgaacacgttctacc
ctggtgggtaaaattcaggttggcgagtattcctcaattattggtttgatcaagcgaacc
cagcgtatctatggaaacgtatttaccgtttccggtgttattgccgcatttcgtcgcagc
gccctggcagaagtgggttactggagtgacgatatgatcaccgaagatattgatattagc
tggaagctgcagttgaatcagtggacgattttttacgagccacgggcactgtgctggata
ttaatgcctgaaacgttaaaagggctgtggaaacagcgcctgcgctgggctcagggcggt
gcagaagtattcctcaaaaatatgacaaggttgtggcgcaaagaaaactttcgaatgtgg
ccgctgttttttgaatactgcctgacgacaatatgggccttcacctgcctggtcggtttc
attatttacgcagtccaacttgccggtgtaccgttaaatattgaattgacacatatcgct
gcgacacatactgccggaatattattgtgtacgttatgtttactgcaatttattgtcagc
ctgatgatcgagaatcgctatgagcataatctgacttcatcgcttttctggattatttgg
ttcccggttattttctggatgctgagcctggcaacgacattggtatcatttacacgagtc
atgttgatgcctaaaaagcaacgcgcccgttgggtaagtcccgatcgcgggattctgaga
ggttaa
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