Escherichia coli DH1: ECDH1ME8569_1048
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Entry
ECDH1ME8569_1048 CDS
T02102
Symbol
ycfS
Name
(GenBank) hypothetical protein
KO
K19236
L,D-transpeptidase YcfS
Organism
edj
Escherichia coli DH1
Pathway
edj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
edj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
ECDH1ME8569_1048 (ycfS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
edj01002
]
ECDH1ME8569_1048 (ycfS)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
edj01011
]
ECDH1ME8569_1048 (ycfS)
Peptidases and inhibitors [BR:
edj01002
]
Cysteine peptidases
Family C82
ECDH1ME8569_1048 (ycfS)
Peptidoglycan biosynthesis and degradation proteins [BR:
edj01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
ECDH1ME8569_1048 (ycfS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
BAJ42904
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All DBs
Position
complement(1146805..1147764)
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AA seq
319 aa
AA seq
DB search
MIKTRFSRWLTFFTFAAAVALALPAKANTWPLPPAGSRLVGENKFHVVENDGGSLEAIAK
KYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPREGIVINIAELRLYYYPPGKN
SVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANIRARYKAQGIELPAVVPAGPD
NPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDDDIKTLFSQVTPGTKVNII
NTPIKVSAEPNGARLVEVHQPLSEKIDDDPQLLPITLNSAMQSFKDAAQTDAEVMQHVMD
VRSGMPVDVRRHQVSPQTL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaacgcgtttttctcgctggctaacgttttttacgttcgccgctgccgtggcg
ctggcgctaccggcaaaagccaacacctggccgctgccgccagcgggcagtcgtctggtt
ggcgaaaacaaatttcatgtggtggaaaatgacggtggttctctggaagccatcgccaaa
aaatacaacgtcggctttctcgctctgttacaggctaaccccggcgttgatccttacgta
ccgcgcgcgggcagcgtgttaacgatcccgttgcaaaccctacttccagatgcgccgcgc
gaaggcattgtgatcaacattgcggagctgcgtctctattactacccgccgggtaaaaat
tcggtaaccgtgtatccaataggtattggtcagttaggtggtgacacgctgacaccgaca
atggtgaccaccgtttcagacaaacgtgcaaacccaacctggacgccaacggcaaacatc
cgcgcccgttataaagcacagggaattgagttgcctgcggtagtgccggctggaccggat
aacccaatgggccatcatgcgattcgtctggcggcctatggcggcgtttatttgcttcat
ggtacgaacgccgatttcggcattggcatgcgggtaagttctggctgtattcgtctgcgg
gatgacgatatcaaaacactctttagccaggtcaccccaggcaccaaagtgaatatcatc
aacactccgataaaagtctctgccgaaccaaacggtgcgcgtctggttgaagtacatcag
ccgctgtcagagaagattgatgacgatccgcagctgctgccaattacgctgaatagcgca
atgcaatcatttaaagatgcagcacaaactgacgctgaagtgatgcaacatgtgatggat
gtccgttccgggatgccggtggatgtccgccgtcatcaagtgagcccacaaacgctgtaa
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