Escherichia coli DH1: ECDH1ME8569_1070
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Entry
ECDH1ME8569_1070 CDS
T02102
Symbol
ymfC
Name
(GenBank) 23S rRNA pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
edj
Escherichia coli DH1
Brite
KEGG Orthology (KO) [BR:
edj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
edj03009
]
ECDH1ME8569_1070 (ymfC)
Enzymes [BR:
edj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
ECDH1ME8569_1070 (ymfC)
Ribosome biogenesis [BR:
edj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ECDH1ME8569_1070 (ymfC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
BAJ42926
LinkDB
All DBs
Position
complement(1171690..1172343)
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AA seq
217 aa
AA seq
DB search
MRQFIISENTMQKTSFRNHQVKRFSSQRSTRRKPENQPTRVILFNKPYDVLPQFTDEAGR
KTLKEFIPVQGVYAAGRLDRDSEGLLVLTNNGALQARLTQPGKRTGKIYYVQVEGIPTQD
ALEALRNGVTLNDGPTLPAGAELVDEPAWLWPRNPPIRERKSIPTSWLKITLYEGRNRQV
RRMTAHVGFPTLRLIRYAMGDYSLDNLANGEWREVTD
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgcggcaattcataatctctgaaaataccatgcaaaaaacttcttttagaaatcaccag
gttaagcgattcagctcgcaacgttctaccaggcgtaaacctgaaaaccagcccacgcgt
gtgatcctgttcaataaaccctacgatgttcttccgcagttcaccgatgaagccggacgc
aaaacattaaaagaattcatcccggttcagggtgtttatgcagcaggtcgccttgaccgc
gatagcgaagggttgctggtgctgaccaataacggcgcgttgcaggcgcgtttaacccag
ccgggtaaacgcaccggaaaaatctattatgtgcaggtggaaggtattcccacacaagac
gcacttgaagccttgcgcaatggcgtaaccttaaatgatggccctaccctgcccgccggc
gcggagctggttgacgaacccgcgtggttatggccgcggaatccaccaattcgtgaacgc
aaaagtattcccaccagctggctgaagatcaccttatatgaaggacgtaatcgccaggtg
cgccgcatgaccgcccatgttggcttccccacgctgcgactgattcgctatgcgatgggt
gattactctttggataatcttgccaatggtgaatggcgagaagtgacagattaa
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