KEGG   Escherichia coli DH1: ECDH1ME8569_1345
Entry
ECDH1ME8569_1345  CDS       T02102                                 
Symbol
ydbA
Name
(GenBank) autotransporter (AT) family porin
  KO
K12516  putative surface-exposed virulence protein
Organism
edj  Escherichia coli DH1
Brite
KEGG Orthology (KO) [BR:edj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:edj02000]
    ECDH1ME8569_1345 (ydbA)
   02044 Secretion system [BR:edj02044]
    ECDH1ME8569_1345 (ydbA)
Transporters [BR:edj02000]
 Other transporters
  Pores ion channels [TC:1]
   ECDH1ME8569_1345 (ydbA)
Secretion system [BR:edj02044]
 Type V secretion system
  Autotransporter-1 (AT-1) family
   ECDH1ME8569_1345 (ydbA)
SSDB
Motif
Pfam: BigA_N
Other DBs
NCBI-ProteinID: BAJ43201
LinkDB
Position
1447574..1450132
AA seq 852 aa
MQRKTLLSACIALALSGQGWAADITEVETTTGEKKNTNVTCPADPGKLSPEELKRLPSEC
SPLVEQNLMPWLSTGAAALITALAVVELNDDDDHHHRNNSPLPPTPPDDESDDTPVPPTP
GGDEIIPDDPDDTPTPPKPVSFNNDVILDKTEKTLTIRDSVFTYTENADGTISLQDSNGR
KATINLWQIDEANNTVALEGVSADGATKWQYNHNGELVITGDNATVNNNGKTTVDGKDST
GTEINGNNGKVIQDGDLDVSGGGHGIDITGDSATVDNKGTMTVTDPESMGIQIDGDKAIV
NNEGESTITNGGTGTQINGDDATANNNGKTTVDGKDSTGTEINGNNGKVIQDGDLDVSGG
GHGIDITGDSATVDNKGTMTVTDPESIGIQVDGDQAVVNNEGESAITNGGTGTQINGDDA
TANNNGKTTVDGKDSTGTEIAGNNGKVIQDGDLDVSGGGHGIDITGDSATVDNKGTMTVT
DPESIGIQIDGDQAIVNNEGESTITNGGTGTQINGNDATANNSGKTTVDGKDSTGTKIAG
NIGIVNLDGSLTVTGGAHGVENIGDNGTVNNKGDIVVSDTGSIGVLINGEGATVSNTGDV
NVSNEATGFSITTNSGKVSLAGSMQVGDFSTGVDLNGNNNSVTLAAKDLKVVGQKATGIN
VSGDANTVNITGNVLVDKDKTADNAAEYFFDPSVGINVYGSDNNVTLDGKLTVVSDSEVT
SRQSNLFDGSAEKTSGLVVIGDGNTVNMNGGLELIGEKNALADGSQVTSLRTGYSYTSVI
VVSGESSVYLNGDTTISGEFPLGFAGVIRVQDKALLEIGSGATLTMQDIDSFEHHGTRTL
DLPLYFQTSVIT
NT seq 2559 nt   +upstreamnt  +downstreamnt
atgcaaaggaaaactctattgtcggcctgtattgcattagctctgagtggtcagggttgg
gcggcagatatcacagaggtagaaaccaccacaggtgaaaagaaaaataccaatgtgact
tgtccggcagacccaggaaaactcagtccggaagagcttaaacgcttaccctctgaatgc
tctcctttagtcgaacaaaacctgatgccatggctttccacaggcgctgctgcgttaatc
acggccttagccgtagtggaactaaacgacgatgatgatcatcatcatcgcaacaattct
ccactcccaccgacaccccctgatgatgaatcagacgacactccagttcccccaactcct
ggcggagatgagataataccggacgatccggatgatacgcctacacctcccaaaccggtt
tcgtttaataatgacgttattctcgataaaacagaaaaaacgttaactattcgcgattca
gtttttacttataccgagaatgctgacgggactatatctctgcaagatagcaatggtcgt
aaggcaacgattaatctttggcagattgatgaagcgaataacactgttgcccttgaaggg
gtgagcgcagatggcgcaacgaagtggcaatataatcacaacggtgagcttgttattacg
ggtgataatgccacagtaaacaacaatggcaaaaccaccgttgacggtaaagattccacc
ggtacggaaatcaacggtaataacgggaaagtgattcaggacggcgatctggatgtcagc
ggcggcggtcacggtattgatatcaccggtgacagcgcgacggtggataacaagggcacc
atgaccgtcaccgatccggagtccatgggtatccagatcgacggtgacaaggccatcgtc
aataacgaaggcgagagcaccatcaccaacggtggcaccggcacccagattaatggtgat
gacgccacggcaaacaacaacggcaaaaccaccgttgacggcaaggattccaccggtacg
gaaatcaacggtaataacggaaaagttattcaggacggcgatctggatgtcagcggcggc
ggtcacggtattgatatcaccggcgacagcgcaacggtggataacaagggcaccatgacc
gtcaccgatccggagtccatcggtatccaggttgacggcgaccaggcggttgttaacaac
gaaggcgagagcgccatcaccaacggtggcaccggcacgcagattaacggtgatgacgcc
acggcaaacaacaacggcaaaaccaccgttgacggcaaggattccaccggtacggaaatt
gctggcaataacgggaaggtgattcaggacggcgatctggatgtcagcggcggcggtcac
ggtattgatatcaccggcgacagcgcaacggtggataacaagggcaccatgaccgtcacc
gatccggagtccatcggtatccagattgacggcgaccaggccatcgtcaataacgaaggc
gagagcactatcaccaatggcggcaccggcactcagatcaacggtaacgacgccaccgcg
aataacagtggaaaaaccactgttgatggaaaagattccacgggtaccaaaatcgcgggc
aatatcggcattgtaaatctggatggtagcctgactgttacaggcggtgcgcatggtgtt
gagaacattggtgacaacggcacggttaacaacaaaggagatattgttgtttccgatact
ggatcgattggcgtgctcatcaacggtgagggggcaacagtatccaatacgggtgatgtt
aacgttagcaatgaagcgacagggttcagcatcacaaccaacagtgggaaggtttcgctg
gcaggcagtatgcaggttggcgatttctcgaccggggtagatcttaatggcaacaataac
agcgtgacgctggcggcaaaagatctaaaagtggtcgggcagaaagcgacgggcataaac
gtttctggcgatgcgaatacagtgaatatcactggtaacgttctggttgataaggataaa
accgcagacaatgcggcggaatatttcttcgatccatccgtgggtatcaacgtttacggc
agtgataataacgtgacgctggatggaaagttaactgttgtatcagacagtgaggttact
tctcgtcagagtaatttatttgatggcagcgcagagaaaacgtcaggtctggttgtgatt
ggcgatggcaataccgttaatatgaatggtggacttgaactgattggagagaaaaacgcg
cttgcagatgggtcgcaggttacttccttgcgcacaggatatagttataccagcgttatt
gtcgttagtggtgagtcgtcggtatatctgaatggagatacgacaatcagcggagaattc
cctctggggtttgccggggttattcgggtacaggataaagctttgctggaaattggcagt
ggcgctacgctaacaatgcaggatattgacagttttgaacatcatgggacaagaaccctg
gatttgcccctatatttccagacatctgttatcacttaa

DBGET integrated database retrieval system