Escherichia coli DH1: ECDH1ME8569_1899
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Entry
ECDH1ME8569_1899 CDS
T02102
Symbol
vsr
Name
(GenBank) DNA mismatch endonuclease of very short patch repair
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
edj
Escherichia coli DH1
Brite
KEGG Orthology (KO) [BR:
edj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
edj03400
]
ECDH1ME8569_1899 (vsr)
DNA repair and recombination proteins [BR:
edj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
ECDH1ME8569_1899 (vsr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
BAJ43755
LinkDB
All DBs
Position
complement(2014251..2014721)
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AA seq
156 aa
AA seq
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MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV
IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR
GREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgttcacgataaggccactcgcagcaaaaatatgcgcgcgattgccacgcgt
gatacggcgatagagaagcgcctcgccagtctgttaaccgggcagggcctggcatttcgc
gttcaggacgccagtctgcccggacgtccggattttgtcgttgatgaatatcgctgcgtg
atatttacccatggctgcttctggcatcatcatcactgctatctgtttaaagtgcctgcg
actcgaaccgagttctggctggagaagataggtaaaaatgttgagcgcgatcgccgcgat
atcagtcgcttgcaggaactcggctggcgcgtattgattgtctgggagtgcgcgttacgt
gggcgcgagaagctgacggatgaagcgcttaccgagcgtctggaagagtggatctgcggc
gaaggtgccagcgcgcagatcgacacgcaggggattcatttactcgcttga
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