Escherichia coli DH1: ECDH1ME8569_2022
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Entry
ECDH1ME8569_2022 CDS
T02102
Symbol
gatR
Name
(GenBank) galactitol utilization operon repressor
KO
K02436
DeoR family transcriptional regulator, galactitol utilization operon repressor
Organism
edj
Escherichia coli DH1
Brite
KEGG Orthology (KO) [BR:
edj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
edj03000
]
ECDH1ME8569_2022 (gatR)
Transcription factors [BR:
edj03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
ECDH1ME8569_2022 (gatR)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DeoRC
Rib_5-P_isom_A
Motif
Other DBs
NCBI-ProteinID:
BAJ43878
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All DBs
Position
complement(2153495..2153941)
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AA seq
148 aa
AA seq
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MLIAEGLMTAKNITVITNSLPAAFALSENKDITLVVCGGTVRHKTRSMHGSIAERSLQDI
NADLMFVGADGIDAVNGITTFNEGYSISGAMVTAANKVIAVLDSSKFNRRGFNQVLPIEK
IDIIITDDAVSEVDKLALQKTRVKLITV
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atgcttatcgccgaaggattaatgaccgccaaaaatatcacggtgattaccaacagtctc
ccggcagcgtttgccctttccgaaaataaagacattactctggtcgtctgtggtggcacg
gtccgccataaaacgcgctcgatgcatggttccattgccgagcgttcattacaggatatt
aatgccgatttaatgtttgtcggtgctgatggtattgatgcggttaatggtattacgacc
tttaatgaaggttattctattagcggtgcgatggtcacagccgctaataaagtgattgcc
gttctcgattcatcgaaatttaaccgtcgcggttttaatcaggtactaccaatcgaaaaa
attgacattattattaccgatgatgctgtgtcagaggtggataaactggcattgcagaag
acgcgggtaaaattaattacggtgtag
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