Escherichia coli DH1: ECDH1ME8569_2256
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Entry
ECDH1ME8569_2256 CDS
T02102
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
edj
Escherichia coli DH1
Brite
KEGG Orthology (KO) [BR:
edj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
edj03016
]
ECDH1ME8569_2256 (truA)
Enzymes [BR:
edj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
ECDH1ME8569_2256 (truA)
Transfer RNA biogenesis [BR:
edj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ECDH1ME8569_2256 (truA)
Prokaryotic type
ECDH1ME8569_2256 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
BAJ44112
LinkDB
All DBs
Position
complement(2419705..2420517)
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AA seq
270 aa
AA seq
DB search
MSDQQQPPVYKIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALSQVANEPITVFCAGRTD
AGVHGTGQVVHFETTALRKDAAWTLGVNANLPGDIAVRWVKTVPDDFHARFSATARRYRY
IIYNHRLRPAVLSKGVTHFYEPLDAERMHRAAQCLLGENDFTSFRAVQCQSRTPWRNVMH
INVTRHGPYVVVDIKANAFVHHMVRNIVGSLMEVGAHNQPESWIAELLAAKDRTLAAATA
KAEGLYLVAVDYPDRYDLPKPPMGPLFLAD
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaccagcaacaaccgccagtttataaaattgcgctgggcattgagtacgacggc
agtaagtattacggctggcaacggcagaacgaagtccgcagtgtgcaggagaagctggaa
aaggcgctctcccaggtggcgaacgaacccatcaccgtcttctgcgccgggcgtactgac
gcaggggtacacggtaccgggcaggttgtgcatttcgaaacaaccgcgctgcgcaaagac
gcggcgtggaccttgggcgtaaatgcgaatttacctggtgacatcgctgtgcgttgggtt
aaaactgtacctgatgattttcatgcccgatttagcgccacggctcgccgttatcgctac
atcatctacaatcatcggctgcgcccggcggtactgagtaaaggggtaacccatttttac
gaaccgctggacgctgaacggatgcatcgggctgcgcaatgcttgctgggcgagaatgat
ttcacctcgttccgtgcggtgcagtgccagtcccgaaccccgtggcgcaacgttatgcat
attaatgtcacgcgtcacggtccttatgtggtggtagatattaaagcgaatgcttttgta
catcatatggtcaggaatattgtcggcagcctgatggaagtcggtgcccacaaccagccg
gagagctggatagcagagttgctggcggcaaaggacagaacgctggcggcagcaacggca
aaagcggaagggctgtatctggtcgcggtggattaccctgaccggtatgatcttccaaaa
ccgccaatgggcccgctatttctggcggactaa
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