Escherichia coli DH1: ECDH1ME8569_2508
Help
Entry
ECDH1ME8569_2508 CDS
T02102
Symbol
yfiF
Name
(GenBank) rRNA methylase
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
edj
Escherichia coli DH1
Brite
KEGG Orthology (KO) [BR:
edj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
edj03009
]
ECDH1ME8569_2508 (yfiF)
03016 Transfer RNA biogenesis [BR:
edj03016
]
ECDH1ME8569_2508 (yfiF)
Ribosome biogenesis [BR:
edj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ECDH1ME8569_2508 (yfiF)
Transfer RNA biogenesis [BR:
edj03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
ECDH1ME8569_2508 (yfiF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
BAJ44364
LinkDB
All DBs
Position
complement(2695400..2696437)
Genome browser
AA seq
345 aa
AA seq
DB search
MNDEMKGKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRADGGRRPARDDKQSQPR
DRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALF
QSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKK
RNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAI
RTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEY
EGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNKA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatgaaatgaaaggtaaaagcggcaaggtcaaagtgatgtatgtccgcagtgat
gatgattctgataaacgtacccacaacccgcgtaccgggaaagggggcgggcgtccagga
aaatctcgtgctgacggtggccgtcgccccgcccgcgatgacaaacagagtcagccccgt
gaccgcaagtgggaagattcgccgtggcgcacggtttcccgcgcgccgggtgatgagacg
ccggaaaaggccgatcacggtggcatcagtggtaaaagttttattgatccggaagtgttg
cgtcgtcagcgtgcggaagaaacccgcgtctacggcgaaaatgcatgtcaggcacttttc
cagagccgtccggaagcgattgttcgcgcctggtttatccagagtgtaacgccgcgtttt
aaagaagctttgcgctggatggcagcaaaccgcaaagcgtaccatgtggtggatgaagcg
gaattgacaaaagcgtcaggcacggaacatcacggcggcgtttgcttcttgatcaaaaag
cgtaacggtacaaccgtgcagcagtgggtaagccaggcaggcgcgcaggattgcgttctg
gcactggaaaacgaatctaacccgcataacctgggtggcatgatgcgcagctgcgcgcac
ttcggcgtgaaaggtgtcgtggtgcaggatgcggcactgctggagtcgggggcggctatc
cgtaccgcagaaggcggcgcagagcacgttcagccgattactggcgacaacattgttaac
gtgctggatgatttccgtcaggcaggttacaccgtagtgaccacttccagcgagcagggt
aaaccgctgttcaaaactagtctgccagcgaaaatggtactggtgctgggtcaggaatat
gaagggttaccggatgccgcacgcgatccgaacgatctgcgcgtgaagattgacggtacg
ggcaacgttgccgggctgaatatctctgtcgcaaccggcgttttgcttggtgaatggtgg
cgtcagaataaagcctga
DBGET
integrated database retrieval system
