Escherichia coli DH1: ECDH1ME8569_2872
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Entry
ECDH1ME8569_2872 CDS
T02102
Symbol
yghJ
Name
(GenBank) putative inner membrane lipoprotein
KO
K10939
accessory colonization factor AcfD
Organism
edj
Escherichia coli DH1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4092
Peptidase_M60
M60-like_N
Trypan_PARP
PQQ
CooC_C
Motif
Other DBs
NCBI-ProteinID:
BAJ44728
LinkDB
All DBs
Position
complement(3092457..3096887)
Genome browser
AA seq
1476 aa
AA seq
DB search
MPEVKPDPTPNPEPTPEPTPDPEPTPEPIPDPEPTPEPEPEPVPTKTGYLTLGGSQRVTG
ATCNGESSDGFTFKPGEDVTCVAGNTTIATFNTQSEAARSLRAVEKVSFSLEDAQELAGS
DDKKSNAVSLVTSSNSCPANTEQVCLTFSSVIESKRFDSLYKQIDLAPEEFKKLVNEEVE
NNAATDKAPSTHTSPVVPVTTPGTKPDLNASFVSANAEQFYQYQPTEIILSEGRLVDSQG
YGVAGVNYYTNSGRGVTGENGEFSFSWGETISFGIDTFELGSVRGNKSTIALTELGDEVR
GANIDQLIHRYSTTGQNNTRVVPDDVRKVFAEYPNVINEIINLSLSNGATLGEGEQVVNL
PNEFIEQFNTGQAKEIDTAICAKTDGCNEARWFSLTTRNVNDGQIQGVINKLWGVDTNYK
SVSKFHVFHDSTNFYGSTGNARGQAVVNISNAAFPILMARNDKNYWLAFGEKRAWDKNEL
AYITEAPSLVEPENVTRDTATFNLPFISLGQVGEGKLMVIGNPHYNSILRCPNGYSWNGG
VNKDGQCTLNSDPDDMKNFMENVLRYLSDDKWKPDAKASMTVGTNLDTVYFKRHGQVTGN
SAAFDFHPDFAGISVEHLSSYGDLDPQEMPLLILNGFEYVTQVGNDPYAIPLRADTSKPK
LTQQDVTDLIAYLNKGGSVLIMENVMSNLKEESASGFVRLLDAAGLSMALNKSVVNNDPQ
GYPNRVRQQRATGIWVYERYPAVDGALPYTIDSKTGEVKWKYQVENKPDDKPKLEVASWL
EDVDGKQETRYAFIDEADHKTEDSLKAAKEKIFAAFPGLKECTNPAYHYEVNCLEYRPGT
GVPVTGGMYVPQYTQLSLNADTAKAMVQAADLGTNIQRLYQHELYFRTNGRKGERLSSVD
LERLYQNMSVWLWNDTSYRYEEGKNDELGFKTFTEFLNCYANDAYAGGTKCSADLKKSLV
DNNMIYGDGSSKAGMMNPSYPLNYMEKPLTRLMLGRSWWDLNIKVDVEKYPGAVSEEGQN
VTETISLYSNPTKWFAGNMQSTGLWAPAQKEVTIKSNANVPVTVTVALADDLTGREKHEV
ALNRPPRVTKTYSLDASGTVKFKVPYGGLIYIKGNSSTNESASFTFTGVVKAPFYKDGAW
KNDLNSPAPLGELESDAFVYTTPKKNLNASNYTGGLEQFANDLDTFASSMNDFYGRDSED
GKHRMFTYKNLPGHKHRFTNDVQISIGDAHSGYPVMNSSFSPNSTTLPTTPLNDWLIWHE
VGHNAAETPLTVPGATEVANNVLALYMQDRYLGKMNRVADDITVAPEYLEESNNQAWARG
GAGDRLLMYAQLKEWAEKNFDIKKWYPDGTPLPEFYSEREGMKGWNLFQLMHRKARGDEV
SNDKFGGKNYCAESNGNAADTLMLCASWVAQTDLSEFFKKWNPGANAYQLPGASEMSFEG
GVSQSAYNTLASLDLPKPEQGPETINQVTEHKMSAE
NT seq
4431 nt
NT seq
+upstream
nt +downstream
nt
ttgccggaagtgaaacctgatccaacaccaaacccggagccgacgcctgagccaacgccg
gacccagagcctacgccagaaccgatacctgatcctgaaccaacaccagaaccggagcca
gaacctgttcctacgaaaacgggttatctgaccctgggcggaagccagcgggtaactggt
gctacctgtaatggtgaatccagcgatggctttacatttaaacctggcgaggacgttact
tgcgtggcgggtaacacgacaattgccaccttcaacactcagtcagaagctgcgcgtagc
ttgcgtgcggttgaaaaagtgtcgtttagccttgaggacgcgcaagaactggcgggctcc
gatgacaagaaaagcaatgcggtttcgctggtaacgtccagtaacagctgtccggcgaat
acagaacaggtttgtctgacgttctcctcggtgatcgagagtaaacgcttcgactcgctg
tataagcaaatcgatctggcaccggaagagttcaaaaagctggtcaatgaagaggtggaa
aacaatgctgcgaccgataaagcgccatccactcatacttcaccggtcgtgcccgtcacc
acgccgggaacaaaaccggatctgaacgcttccttcgtgtcggctaacgcggaacagttt
tatcagtatcaacccactgaaatcattctctctgaaggtcgactggtcgatagccaggga
tatggtgttgctggcgtcaactactacaccaattcaggccgtggcgtgacaggggaaaat
ggtgaattttcctttagctggggcgaaaccatctcctttggtatcgatacctttgaactg
ggttcagtgcgcggcaataagtcgaccattgcgctgactgaactgggtgatgaagttcgc
ggggcgaatattgatcagcttattcatcgctattcgacgaccgggcaaaataatacccgt
gttgttccggacgatgtacgcaaggtctttgccgaatatcccaacgtgatcaacgagatt
atcaatctctcgttatccaacggtgcgacgctgggggaaggtgagcaagtcgttaatctg
cctaacgaatttattgagcagtttaatacgggtcaggccaaagagatcgataccgcgatt
tgtgcgaaaaccgatggttgtaacgaggctcgctggttctcgctgacgacgcgcaatgtt
aatgacggccagattcagggcgttatcaacaagctgtggggcgtggatacgaactacaaa
tctgtcagcaagttccatgtattccatgactccaccaacttctatggcagcacgggtaat
gcgcgcggtcaggcggtggtgaatatctccaacgcggccttcccgattctgatggcgcgt
aatgataaaaactactggctggccttcggcgaaaaacgcgcctgggataaaaacgagctg
gcgtacattacggaagcgccttctcttgttgagccggaaaacgttacgcgcgataccgcc
acctttaacctgccgtttatttcgctggggcaagtcggtgagggcaaactgatggttatc
ggtaacccacactacaacagcattttgcgttgcccgaacggttacagctggaacgggggc
gttaataaagatgggcagtgtacgctcaacagcgacccggatgacatgaagaacttcatg
gagaacgtgctgcgctatctgtccgacgataaatggaagccggacgcgaaagccagcatg
accgtaggcaccaacctggatactgtctattttaaacgtcatggtcaggttacaggaaac
agcgctgcgttcgacttccatccggattttgcgggcatctctgttgagcatttaagtagc
tatggcgatctcgatccgcaggaaatgccgctgctgatccttaacggctttgaatatgtg
actcaggtgggtaacgatccttatgcaatcccgctgcgtgcagataccagcaaaccgaag
ctgactcagcaggatgtgaccgatctgatcgcctatctgaacaaaggtggatcggtgctg
atcatggaaaacgtgatgagcaatcttaaggaagagagcgcgtctggttttgtgcgtctg
ttggatgccgcaggtctgtcgatggcactgaacaagtcggtagtaaataacgatccgcaa
gggtatccgaaccgcgttcgtcagcagcgcgcaacgggcatttgggtctatgaacgttat
cctgccgtagatggtgcgctgccgtacaccatcgatagtaagacaggggaagttaagtgg
aaatatcaggtagaaaacaaacctgatgacaaaccgaagctggaagttgccagctggctg
gaagatgtagatggcaaacaggaaacgcgttatgcctttattgatgaggccgatcataaa
acagaggattctctgaaggctgcgaaggagaaaattttcgccgcgttcccggggctgaaa
gagtgtactaatccggcatatcactatgaggtcaactgcctggaatatcgtcctggcacg
ggggttccggttactggtggcatgtatgttccacagtatacgcaactaagccttaacgcc
gacactgcaaaagcgatggtgcaggctgcggatttaggcaccaacattcagcgtctgtat
cagcatgagctctacttccggaccaatggtcgcaaaggtgagcgtctgagcagcgtcgat
ctggaacgtctgtaccagaacatgtcggtctggctgtggaacgatacgagctatcgttat
gaagaaggcaaaaatgacgagctgggctttaaaacgttcaccgagttcctgaactgctac
gccaatgatgcctatgcaggcggcaccaagtgttctgcagatctgaaaaaatcgctggtc
gataacaacatgatctacggtgacggtagcagcaaagcgggcatgatgaacccgagctac
ccgctcaactatatggaaaaaccgctgacacgcctgatgctgggccgttcctggtgggat
ctgaacatcaaagttgatgtcgagaagtatccgggagcagtatcggaagagggacagaac
gttactgaaaccatcagcctgtactcgaatccgaccaaatggtttgcaggtaacatgcag
tcaactggcctgtgggcaccggctcagaaagaggtcaccattaagtccaatgcgaacgtt
cctgtgaccgtcaccgtggcgctggctgacgacctgaccggacgtgagaagcatgaagtt
gcgctgaaccgtccgccaagagtgactaaaacgtactctctggacgctagcggtacggtg
aagttcaaggtgccttacggtggcctgatttatatcaagggcaatagctctaccaatgaa
tctgccagcttcacctttactggcgtggtaaaagcaccgttctataaagacggcgcatgg
aaaaacgatctgaactcaccggctccgctgggtgagctggaatcagacgctttcgtctat
accacaccgaagaagaacctgaatgccagcaattacactggcggactggagcaattcgct
aacgatctggatacctttgccagctcgatgaatgacttctacggccgtgatagcgaagac
ggtaagcaccggatgtttacctataaaaacttgccgggccacaaacatcgtttcaccaac
gatgtgcagatctccatcggtgatgcgcattcgggttatccggtaatgaacagcagcttc
tcgccgaacagcaccacgctgccgacgacgccgctgaacgactggctgatctggcatgaa
gtcggtcataacgccgcagaaacgccgttgactgtaccgggtgcaactgaagtcgctaac
aacgtgctggcgctgtacatgcaggatcgttatctcggcaagatgaaccgtgtcgctgac
gatattaccgtcgcaccggaatatctggaggagagcaacaaccaggcatgggcacgcggc
ggtgcgggtgaccgtctgctgatgtacgcacagctgaaggaatgggcagagaaaaacttt
gatatcaagaaatggtatccagatggcactcctctgccagagttttacagcgagcgtgaa
gggatgaaaggctggaacctgttccagttgatgcatcgtaaagcacgcggcgatgaggtc
agcaatgacaagtttggcggcaagaattactgtgctgaatccaacggtaacgcagcggac
acgctgatgctgtgtgcctcctgggtcgcccagacggatctttcggagttctttaagaaa
tggaatccgggcgcgaatgcttaccagctgccgggggcgagcgagatgagcttcgagggc
ggtgtgagccagtcggcttacaacacgctcgcgtcactcgatctgccgaaaccggaacag
ggaccggaaaccattaatcaggttaccgagcataagatgtctgccgagtaa
DBGET
integrated database retrieval system
