Escherichia coli DH1: ECDH1ME8569_3517
Help
Entry
ECDH1ME8569_3517 CDS
T02102
Symbol
rfaQ
Name
(GenBank) lipopolysaccharide core biosynthesis protein
KO
K02849
lipopolysaccharide heptosyltransferase III [EC:
2.4.99.25
]
Organism
edj
Escherichia coli DH1
Pathway
edj00540
Lipopolysaccharide biosynthesis
edj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
edj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
ECDH1ME8569_3517 (rfaQ)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
edj01005
]
ECDH1ME8569_3517 (rfaQ)
Enzymes [BR:
edj01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.25 lipopolysaccharide heptosyltransferase III
ECDH1ME8569_3517 (rfaQ)
Lipopolysaccharide biosynthesis proteins [BR:
edj01005
]
Core region
ECDH1ME8569_3517 (rfaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
BAJ45373
LinkDB
All DBs
Position
complement(3784970..3785986)
Genome browser
AA seq
338 aa
AA seq
DB search
MLLTTPVISTLKQNYPDAKIDMLLYQDTIPILSENPEINALYGISNKGAGTFDKIKNVLS
LIKTLRANNYDLVINLTDQWMVALLVRCLPARMKISQLYGHRQHGIWKKSFTHLAPIHGT
HIVERNLSVLEPLGITDFYTDTTMSYAEDCWKKMRRELDALGVKDHYVVIQPTARQIFKC
WDNDKFSKVIDALQQRGYQVVLTCGPSADDLACVDEIARGCETKPITGLAGKTRFPELGA
LIDHAVLFIGVDSAPGHIAAAVKTPVISLFGATDHVFWRPWTENIIQFWAGNYQKMPTRH
ELDRNKKYLSVIPAEDVIAATEKLLPEDAPSADRNAQL
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgttattaactactcctgtcatcagtacgctcaagcagaattatcctgatgcaaaaatc
gatatgctgctttatcaggacaccatccctattttgtctgaaaacccggaaattaatgcg
ctctatgggataagcaataaaggtgcgggaactttcgataaaattaaaaatgtgctttcg
ttgataaaaactctgcgtgcgaataattatgacctggtcattaatcttacggatcagtgg
atggtggcgctgctggtacgttgtttacctgcacggatgaaaatatcgcaactttatggt
catcggcagcatggtatttggaaaaaaagcttcacacacttagcgccaatacacggtaca
catattgttgagcgtaatttatcggtccttgagccattaggtattaccgatttctacacc
gacacaacaatgagttacgccgaagattgctggaagaagatgcgccgggaattagatgcc
ctgggcgtaaaagatcattatgttgtcatccaaccgacagcgcgtcagatatttaagtgt
tgggataacgataaattttctaaggttatcgatgcgctgcaacagcgaggctatcaggtt
gtgctaacctgtgggccctcggcagatgatctcgcttgtgtagatgagattgcacgaggt
tgcgaaacaaaacccattactggccttgcaggtaaaacacgttttcctgaactgggtgca
ttaattgatcatgcagtgctttttattggtgtggattctgcgccgggacatattgcagcg
gcagtgaaaacgccagtcattagtctatttggtgcaacggatcacgtattctggcgtccc
tggaccgagaatattattcaattctgggcggggaattatcagaaaatgccgacccggcat
gaacttgaccgcaacaaaaaatatctttctgttatcccagcggaggatgtgatcgccgct
acggaaaagctgttgccagaagatgccccttcagctgacaggaatgcacaattatga
DBGET
integrated database retrieval system
