Escherichia coli DH1: ECDH1ME8569_3917
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Entry
ECDH1ME8569_3917 CDS
T02102
Symbol
ssb
Name
(GenBank) single strand DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
edj
Escherichia coli DH1
Pathway
edj03030
DNA replication
edj03430
Mismatch repair
edj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
edj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ECDH1ME8569_3917 (ssb)
03430 Mismatch repair
ECDH1ME8569_3917 (ssb)
03440 Homologous recombination
ECDH1ME8569_3917 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
edj03032
]
ECDH1ME8569_3917 (ssb)
03400 DNA repair and recombination proteins [BR:
edj03400
]
ECDH1ME8569_3917 (ssb)
03029 Mitochondrial biogenesis [BR:
edj03029
]
ECDH1ME8569_3917 (ssb)
DNA replication proteins [BR:
edj03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ECDH1ME8569_3917 (ssb)
DNA repair and recombination proteins [BR:
edj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
ECDH1ME8569_3917 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
ECDH1ME8569_3917 (ssb)
Mitochondrial biogenesis [BR:
edj03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
ECDH1ME8569_3917 (ssb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSB
OSB_SSB
SSB_1
DUF3127
Phage_attach
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BAJ45773
LinkDB
All DBs
Position
4253230..4253766
Genome browser
AA seq
178 aa
AA seq
DB search
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVL
FGKLAEVASEYLRKGSQVYIEGQLRTRKWTDQSGQDRYTTEVVVNVGGTMQMLGGRQGGG
APAGGNIGGGQPQGGWGQPQQPQGGNQFSGGAQSRPQQSAPAAPSNEPPMDFDDDIPF
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atggccagcagaggcgtaaacaaggttattctcgttggtaatctgggtcaggacccggaa
gtacgctacatgccaaatggtggcgcagttgccaacattacgctggctacttccgaatcc
tggcgtgataaagcgaccggcgagatgaaagaacagactgaatggcaccgcgttgtgctg
ttcggcaaactggcagaagtggcgagcgaatatctgcgtaaaggttctcaggtttatatc
gaaggtcagctgcgtacccgtaaatggaccgatcaatccggtcaggatcgctacaccaca
gaagtcgtggtgaacgttggcggcaccatgcagatgctgggtggtcgtcagggtggtggc
gctccggcaggtggcaatatcggtggtggtcagccgcagggcggttggggtcagcctcag
cagccgcagggtggcaatcagttcagcggcggcgcgcagtctcgcccgcagcagtccgct
ccggcagcgccgtctaacgagccgccgatggactttgatgatgacattccgttctga
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integrated database retrieval system
