Edwardsiella sp. LADL05-105: AAZ33_00395
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Entry
AAZ33_00395 CDS
T04005
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
edl
Edwardsiella sp. LADL05-105
Pathway
edl00521
Streptomycin biosynthesis
edl00523
Polyketide sugar unit biosynthesis
edl00525
Acarbose and validamycin biosynthesis
edl00541
Biosynthesis of various nucleotide sugars
edl01100
Metabolic pathways
edl01110
Biosynthesis of secondary metabolites
edl01250
Biosynthesis of nucleotide sugars
Module
edl_M01025
dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
Brite
KEGG Orthology (KO) [BR:
edl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
AAZ33_00395 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
AAZ33_00395 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
AAZ33_00395 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
AAZ33_00395 (rfbB)
00525 Acarbose and validamycin biosynthesis
AAZ33_00395 (rfbB)
Enzymes [BR:
edl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
AAZ33_00395 (rfbB)
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Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
KR
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
AKR76418
LinkDB
All DBs
Position
84740..85804
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AA seq
354 aa
AA seq
DB search
MRRILVTGGAGFIGSAVVRHIIMDTTDSVVVVDKLTYAGNLASLAPVVDSDRYAFERADI
GDRAAMDRILAQYRPDAIMHLAAESHVDRSIDGPADFIQTNIVGTYTLLEATRGYWSALP
AAQRAAFRFHHISTDEVYGDLHGPQALFREDTPYAPSSPYSASKAASDHLVRAWLRTYGL
PTLITNCSNNYGPYHFPEKLIPLTIINALAAKPLPVYGNGLQVRDWLYVEDHARALYRVL
TTGRVGETYNIGGHNEQRNIDVVTTLCALLQEMVPEKPVGVRHFADLITYVADRPGHDVR
YAIDAAKIERELGWRPQETFESGIRKTVAWYLANERWWRAVMDGSYAGERLGLA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
gtgagacgcattttggtcaccggcggcgccggctttatcggctcggccgttgtgcggcat
atcatcatggatacgaccgacagcgtggtggtggtcgacaagctgacctacgccggtaat
ctggcctcgctagcgccggtggtggacagcgatcgctatgcgtttgagcgggcggatatc
ggcgaccgcgcggcgatggatcggatccttgcccagtaccggccggatgccattatgcat
ctagcggccgagagccacgtcgatcgctctatcgacggcccggcggattttattcagacc
aacatcgtgggcacttataccctgctggaggcgacgcgtggatactggagcgcgttgccg
gcggcgcagcgggcggcattccgtttccatcatatttctaccgacgaggtgtatggggat
ctgcacggtccgcaggcgttgttccgcgaagatacgccctatgcgccgagcagcccctac
tctgcctccaaggccgccagcgatcatctggtacgcgcctggctgcgcacctacggactg
ccgacgctgatcaccaactgctcgaataactacggtccctaccactttccggaaaaactg
atcccgctgaccatcatcaatgcgctggctgctaagccgctgccggtttatggcaatggc
ctgcaggtgcgcgactggctgtacgtcgaggatcatgcccgcgcgctgtatcgggtgctg
acgaccgggcgagtgggggagacctataacatcggcggtcacaacgaacagcgcaacatt
gatgtggtgacgacgctgtgcgcattgctgcaggagatggtgccggaaaaacccgtcggc
gtgcgccattttgccgatctgatcacctatgtggcggatcgcccaggtcatgatgtgcgc
tatgcgatcgacgccgccaagatcgagcgagagctgggctggcggccacaggagaccttt
gagagcggtatccgcaagacggtcgcctggtacctggccaatgagcgctggtggcgcgcc
gtgatggatggctcctatgccggtgaacggttggggctggcctga
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