Edwardsiella sp. LADL05-105: AAZ33_01550
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Entry
AAZ33_01550 CDS
T04005
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
edl
Edwardsiella sp. LADL05-105
Pathway
edl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
edl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AAZ33_01550 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
edl03019
]
AAZ33_01550 (orn)
03009 Ribosome biogenesis [BR:
edl03009
]
AAZ33_01550 (orn)
Messenger RNA biogenesis [BR:
edl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AAZ33_01550 (orn)
Ribosome biogenesis [BR:
edl03009
]
Eukaryotic type
Pre-60S particles
RNases
AAZ33_01550 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AKR76600
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All DBs
Position
354848..355393
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AA seq
181 aa
AA seq
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MSASETRLIWIDLEMTGLDPQRDRIIEIATLVTDADLNVLAEGPVIALHQDDAQLALMDE
WNVRTHTASGLVARVKASQYDDAAAEQATLDFLRQWVPAGVSPICGNSVGQDRRFLFRYM
PELERYFHYRYLDVSTLKELARRWKPEILEGFKKKNTHQALDDIRESVAELAYYRTHFIQ
P
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaagtgaaacgcgtttgatttggatcgatctggaaatgaccggactggatccg
cagcgcgaccggatcattgagatcgccacgctggtgacggatgccgatctgaacgtgctg
gcggaagggccggtgattgcgctgcatcaggatgacgcccaactggcgctgatggatgag
tggaatgtgcgtacccataccgccagcgggctggtggcgcgggtgaaggccagtcagtac
gatgatgcggccgccgaacaggcgaccctcgactttttgcgtcagtgggtacccgcgggc
gtctctccgatctgtggcaacagcgtcggccaggatcgtcgcttcctgttccgctatatg
ccggagctggagcgctatttccactaccgctatctggatgtcagcaccctgaaagagctg
gcgcgccgttggaagccggagatcttggaggggttcaagaagaagaatacccatcaggcg
ttggacgacattcgtgaatcggtggctgagctggcgtattaccgtacgcattttatccag
ccatag
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