Edwardsiella sp. LADL05-105: AAZ33_01885
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Entry
AAZ33_01885 CDS
T04005
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
edl
Edwardsiella sp. LADL05-105
Brite
KEGG Orthology (KO) [BR:
edl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
edl03016
]
AAZ33_01885 (truB)
Enzymes [BR:
edl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AAZ33_01885 (truB)
Transfer RNA biogenesis [BR:
edl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AAZ33_01885 (truB)
Prokaryotic type
AAZ33_01885 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UBU94825
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All DBs
Position
417883..418845
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AA seq
320 aa
AA seq
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MSRPRRRGRDINGVLLLDKGQGMSSNDVLQKVKRIYNANKAGHTGALDPLATGMLPICLG
EATKFSQFLLDADKRYRVVARLGQRTDTSDADGQVVCERPLTFSEAELAQALEGFRGPGR
QVPSMYSALKYQGRPLYEYARQGIDVPRESREITVFELRFIRWEGDELELEIHCSKGTYI
RTIIDDLGEVLGCGAHVIYLRRLQVSGYPSERMVTLEQLQALLAQAQQQERDPRLLLDPL
LLPMDTAAAHLPEVNLSEIVAGYIQLGQPVQTPDLLQSGMVRISVGAARRFIGVGEVDEL
GRLAPRRMVVASRLSEDDPV
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgaccccgtcgccgcggccgcgatattaacggcgtcctgctgctggataaaggg
caggggatgtcctctaacgatgtgctgcagaaggtaaagcgcatctataacgccaacaag
gcggggcataccggcgcgctggatccgctggcgactgggatgctgccgatttgcctgggt
gaagcgaccaagttttctcagtttttgctggatgccgacaagcgctatcgtgtcgtcgcc
cgcctggggcagcgtaccgatacctccgacgccgatggtcaagtggtgtgtgagcgaccg
ctgacattcagcgaggccgagctagcgcaggcgctggaggggttccgcggccctggtcgc
caggtaccctctatgtattcggcgctcaagtaccaggggcgcccgctgtacgaatatgct
cgtcaggggatcgatgtgccgcgcgaatcgcgtgagatcacggtgtttgagctgcgcttt
atccgctgggaaggggatgagctggagctggagatccactgctccaagggcacctatatt
cgcaccattatcgacgatctgggcgaagtgctcggctgcggcgcgcacgttatctatctg
cggcgcctgcaggtttccggctatccgagcgagcggatggtcacgctggagcagctgcag
gcgctgctggcgcaggcgcagcagcaagagcgcgatccccgcctgctgctcgatccgcta
ctgctgccgatggatacggccgccgcgcacctgccggaggtgaatctgtcggagatcgtc
gctggctatatacagctggggcagccggtacagacgccggacctgctgcaaagcggcatg
gtgcgcatcagcgtcggggcggcgcgccgctttatcggcgtcggtgaggtggacgagctg
gggcgcctggcgccgcgccgtatggtagtggcatcgcgcctctccgaggacgatccggtc
tga
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