Edwardsiella sp. LADL05-105: AAZ33_01895
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Entry
AAZ33_01895 CDS
T04005
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
edl
Edwardsiella sp. LADL05-105
Pathway
edl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
edl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAZ33_01895 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
edl03019
]
AAZ33_01895 (pnp)
03016 Transfer RNA biogenesis [BR:
edl03016
]
AAZ33_01895 (pnp)
Enzymes [BR:
edl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AAZ33_01895 (pnp)
Messenger RNA biogenesis [BR:
edl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AAZ33_01895 (pnp)
Transfer RNA biogenesis [BR:
edl03016
]
Prokaryotic type
tRNA degradation factors
AAZ33_01895 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
S1_2
OB_RRP5_4th
S1_RRP5
aRib
KH-I_KHDC4-BBP
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
AKR76656
UniProt:
A0AAC8V7I6
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All DBs
Position
419519..421642
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AA seq
707 aa
AA seq
DB search
MLTPTVRKFQYGQHTVTLETGMMARQATAAVMVTMDDTAVFVTVVGAKKAREGQDFFPLT
VNYQERAYAAGRFPGGFFRREGRPGEGETLTARLIDRPIRPLFPEGFLNEVQVVATVVSV
NPQVSPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKQSRLDLVVA
GTDNAVLMVESEADLLSEDQMLGAVVFGHEQQQIVIENIKALAAEVGKPRWEWHAPEVNV
ALQRRVAEMAEARLGEAYHITEKQSRYAKVDEIKESVIADLLAEDDALDAGEISDILGAL
EKAVVRGRVLRGEPRIDGREKDMIRALDVRTGVLPRTHGSALFTRGETQALVTATLGTER
DAQNIDELMGERTDRFLLHYNFPPYSVGETGMMGSPKRREIGHGRLAKRGVLAVMPSQDA
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEQDNFVVLSD
ILGDEDHLGDMDFKVAGSRDGVTALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
INAPRGDISEFAPRIHTIKINPEKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGDKAKHAIRRIEEITAEIEVGRIYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVAVKVLEVDRQGRVRLSIKEANASAAAGQDAPTDAE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
ttgttaacgccaaccgttcgcaaattccaatacggccagcataccgttacgctggaaacc
ggcatgatggcacgccaggctaccgcagccgtgatggtgaccatggatgacaccgcggta
ttcgttaccgtggttggggcgaaaaaagcccgtgaaggtcaggacttcttcccgctgacc
gttaactaccaggagcgcgcctacgcggccggtcgtttccccggcggcttcttccgccgt
gaaggccgtccgggcgaaggtgagaccctgaccgcgcgtctgatcgaccgtccgatccgc
ccgctgttcccggaaggcttcctcaatgaggtgcaggtcgttgcgaccgtagtttccgtg
aatccgcaggtcagcccggatatcgtggcgatgatcggtgcatccgcggcgctgagcctg
tctgggatcccgttcaacggcccgatcggtgccgctcgcgtgggttacatcaacgatcag
tacgtgctgaacccgactcaggatgagctcaaacagagccgtctggatctggtggtggcc
ggtaccgacaacgccgtgctgatggtggaatctgaagccgatctgctcagcgaagatcag
atgctgggcgcggtggtcttcggccacgagcagcagcagatcgtcatcgaaaatatcaaa
gcgctggccgccgaagtcggtaaaccgcgctgggaatggcatgcgccggaagtgaatgtt
gcgctgcagcgccgcgtggccgagatggccgaggcccgcctgggcgaagcctatcacatc
actgaaaagcagtcccgctacgcgaaagttgacgagatcaaagagtccgtcatcgccgat
ctgctggcggaagacgatgcgctggatgccggtgagatcagcgatatcctgggtgcgttg
gagaaagccgtggtgcgtggccgcgttctgcgcggtgagccgcgtatcgatggccgtgag
aaggacatgatccgtgcgctggacgtgcgtaccggcgtactgccgcgtacccatggctct
gcgctgtttacccgtggcgaaacgcaggcgctggtgactgcgaccctgggcaccgaacgc
gatgcgcagaatatcgatgagctgatgggcgagcgcaccgaccgtttcctgctacactat
aacttcccgccgtactccgtcggtgaaaccgggatgatgggctcaccgaagcgccgtgaa
atcggccatggccgtctggctaagcgcggtgtgctggcggtaatgccgtctcaggatgcg
ttcccgtacacggtgcgtgtggtctctgaaatcactgagtccaacggttcctcctctatg
gcctctgtctgcggtgcctctctggcgctgatggacgccggtgtgccgatcaaagctgcc
gtagcgggtatcgccatgggtctggtaaaagagcaggataactttgtcgttctgtctgac
atcctgggtgacgaagaccacctgggcgatatggactttaaagtggccggtagccgcgac
ggcgtgaccgcgctgcagatggatatcaagatcgaaggcatcacccgcgagatcatgcag
gttgccctgaaccaggccaagggtgcgcgtctgcatatcctgggcgtgatggagcaggcg
atcaatgcgccgcgcggcgatatttccgaattcgccccgcgtatccataccattaagatc
aatcctgagaaaatcaaggacgtgatcggtaagggcggttctgtgatccgcgcgctgacg
gaagagaccggtaccaccatcgaaatcgaagatgacggtaccgtgaagatcgcagcgacc
gacggtgataaggccaaacacgccattcgccgcatcgaagagatcaccgccgagatcgaa
gtgggccgtatctatcagggtaaagtgacccgtatcgttgactttggcgcctttgtggcc
atcggcggcggtaaagagggtctggttcatatttctcagatcgccgacaagcgcgtagag
aaagtgaccgactacctgcagatgggtcaggaagtggctgttaaggtgctggaagtcgac
cgtcagggtcgcgtacgcctgagcatcaaggaagccaacgccagcgcagctgcgggtcag
gacgcaccgactgacgcagagtaa
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