Edwardsiella sp. LADL05-105: AAZ33_03365
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Entry
AAZ33_03365 CDS
T04005
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
edl
Edwardsiella sp. LADL05-105
Pathway
edl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
edl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AAZ33_03365 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
edl03400
]
AAZ33_03365 (recD)
Enzymes [BR:
edl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AAZ33_03365 (recD)
DNA repair and recombination proteins [BR:
edl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AAZ33_03365 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
Helicase_RecD
SH3_13
AAA_11
AAA_22
UvrD-helicase
PhoH
AAA_16
SLFN-g3_helicase
AAA_28
UvrD_C
nSTAND3
DEAD
MCD_N
Motif
Other DBs
NCBI-ProteinID:
UBU94846
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All DBs
Position
754085..755938
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AA seq
617 aa
AA seq
DB search
MRESLLSQMAQQRTLRPLDLQFATLLAGPQQLHLALAAALVSQELAAGHVCLPLAALDTA
TLSQRFPQQADAWPALLAGWDVARWRDYLLAQPCVSGGERATPLVVSHDCLYLQRLWRDE
GTVAAFFADACAQPRRVDEALALVLHRLFPTTAQRPDWQQVAAAVAVTRRASVISGGPGT
GKTTTVARLLAALVALAPGRMPRIQLAAPTGKAAARLGESLGQALAALALAPDQLQAMPR
EALTLHRLLGARADSARLRYHRDNPLHLDVLVVDEASMVDLPMMARLIEALPPQAQLILL
GDRDQLASVEAGAVLGELCRFAEYGFSAARAAELSRLCDAPIPAGETQPAVALRDAISLL
RHSYRFDARSGIGQLALAVNRGDRRMAMACLADRFADLHWHEIAQDEDYQTLLTCCLAGY
RPMLEGILRGEAPAQILAEFARFRPLCALREGPFGLHGLNDRIALTLQRAGLIRRTHEGQ
KHWYAGRPVMITRNDASQALFNGDIGITLGDEQSGWQVWFMGSDGAPRAVQPNRLPPHET
AWAMTVHKSQGSEFDHTLLALPTQPSPVVTRELVYTAITRARQQLTLFATRPVLERAIRT
PTERRSGLMARLLAAAD
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtccctactctcccagatggcgcagcagcgtacgctgcgcccgctggatctg
cagtttgccacgctgttggccgggccgcagcagctgcacctggcgctggccgcggcgctg
gttagccaagagctggccgccgggcatgtctgcctgccgctggcggcgctggatacggcg
acgctgagccagcgctttccgcagcaggccgatgcctggcctgcactgctcgcgggatgg
gacgtcgcccgctggcgggactacctgctggcgcagccctgtgtcagcggcggcgagagg
gcgacgccgctggtggtgagccacgattgcctgtatctacagcggctatggcgtgatgag
ggtacggtggcggcctttttcgccgacgcctgtgcgcagccgcggcgggtcgatgaggcg
ctggcgttggtgctgcatcgcctgttcccgactacggcccagcgcccggactggcagcag
gtggccgcggccgtggcggtgacgcgccgggcgtcggtgatctccggcggccccggcacc
ggtaagaccacaaccgttgcgcgcctgttggcggcgttagtcgcgctggcgccagggcgg
atgccgcgcattcagctggcggcgccgacgggtaaggcggcggcgcgtctgggcgagtcg
ctggggcaggccttggcggcattggcgctggcaccggatcagctacaggcgatgccgcgc
gaagcgctgacgctgcatcgcctgctgggtgcccgcgcagacagcgcccgcttgcgctat
caccgggataatccgctgcatctggatgtgctggtggtggatgaggcttcgatggtggat
ctgccgatgatggcgcggctgatcgaggcgctgccgccgcaggcgcagctgatcctgctg
ggagatcgcgatcagctggcttcggtcgaggccggcgcggtgctgggggagctgtgccgc
tttgccgaatatggcttcagcgccgcgcgcgcggccgagctgagccggctgtgcgatgcg
ccgatccccgccggagagacgcagcctgcggtcgccctgcgtgacgccatcagcctgctg
cgtcacagctaccgcttcgacgcccgttcagggatcgggcagctggcgctggccgtcaat
cggggcgatcgccggatggctatggcgtgcctggcggatcgctttgccgatctgcattgg
catgaaatcgctcaggatgaagactaccagacgctcttaacgtgctgtctggcggggtat
cgcccgatgctggaggggatcctgcgcggagaggcgccggcgcagatcctggccgagttt
gcccgcttccgtccgctgtgcgccctgcgtgagggcccctttggcctgcatggccttaac
gaccgtatcgccctgacgctgcagcgggcggggctgatccggcgcacgcatgaggggcaa
aagcactggtatgctgggcgtccggtgatgatcacccgcaacgacgccagtcaggcgctg
tttaacggcgatatcggtattacgctgggcgatgagcagagcggctggcaggtgtggttt
atgggcagcgacggcgcgccgcgcgcggtacagcccaaccggctaccgccccatgagacg
gcctgggcgatgacggtgcacaagtcgcagggatcggagttcgaccatacgctgctggcg
ctgccgacccagccgtcgccggtggtgacgcgtgagctggtgtataccgccatcacgcgg
gcgcggcagcagctgacgctctttgcgacccggccggtgctggagcgggccattcgcacg
ccgaccgaacggcgcagcgggctgatggcccgtctgctggccgccgccgattaa
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