KEGG   Edwardsiella sp. LADL05-105: AAZ33_06080
Entry
AAZ33_06080       CDS       T04005                                 
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
edl  Edwardsiella sp. LADL05-105
Pathway
edl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:edl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    AAZ33_06080 (sbcB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:edl03400]
    AAZ33_06080 (sbcB)
Enzymes [BR:edl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     AAZ33_06080 (sbcB)
DNA repair and recombination proteins [BR:edl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     AAZ33_06080 (sbcB)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AAZ33_06080 (sbcB)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AAZ33_06080 (sbcB)
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-ProteinID: AKR77319
UniProt: A0AAC8ZL48
LinkDB
Position
complement(1340953..1342380)
AA seq 475 aa
MKNRSIQNTFLFHDYETFGQHPARDRPAQFAGVRTDADFNIIEEPQVFYCRPADDYLPQP
DAVMITGITPQTALAQGVCEAEFAERIHRMFSVPGTCVVGYNNIRFDDEVSRNLFYRNFF
DPYAYSWQNGNSRWDLLGVVRTCYALRPEGIVWPENEQGLPSFKLEHLSQANGIEHSNAH
DAMADVYATIALARLVKQAQPRLFDYLFQLRNKNRVAQLIDIATMTPLVHVSGMFGALRG
NTSLIAPLAWHPENKNAVIVCDLDSDITPLLTLDPAALRERLYTPRSELGDAVPVPIKLV
HINKCPVLAPEKTLLADNAVRLGLDRPRCRDNLALLQQHSEIRDKVVSLFADAPPFPPSD
DVDNQLYDGFFSDADRQAMQIIRATQPQNLPALDLRFSDRRITPLLFRYRARNYPATLDE
SEMRRWQQHRQAMLTPQRVQDYLQTLEMLYNRYEDQPQRLTLLRALFDYARELVG
NT seq 1428 nt   +upstreamnt  +downstreamnt
gtgaaaaaccgaagcatacaaaatacattcctgtttcacgactatgaaaccttcggtcag
catccggcgcgggatcgtcccgctcagttcgccggcgtgcgcaccgacgccgacttcaac
atcatcgaagaaccccaggtgttttactgccggccggccgatgattacctgccccagccc
gacgcggtgatgatcaccgggatcaccccgcagacggcgctggcgcagggggtctgtgag
gccgaattcgccgagcgtatccaccggatgttcagcgtgccgggcacctgtgtcgtgggc
tataacaacattcgcttcgacgatgaggtgagccgcaacctgttctaccgcaacttcttt
gacccctacgcctacagctggcaaaacggcaactctcgctgggatctgctgggtgtggtg
cgcacctgctacgccctgcgccccgaggggatcgtctggccggaaaacgagcaggggttg
cccagcttcaagctggagcacctgtctcaggccaacggcattgagcacagcaacgcccac
gacgccatggccgatgtctacgccaccatcgcgctggccaggctggtcaaacaggcccag
ccgcggctgttcgactatctgttccagctgcgcaacaagaaccgggtggctcagcttatc
gatatcgccacgatgacgcccctggtgcatgtctccggcatgttcggcgccctgcgcggt
aacaccagcctgatcgccccgctggcctggcatcccgagaataaaaacgcggtgatcgtc
tgcgatctggacagcgatatcaccccgctgctgaccctggaccccgccgccctgcgcgaa
cggctctacacgccgcgcagcgagctgggcgacgccgtgccggtgcccatcaagctagtc
catatcaataaatgtccggtgctggcgccggagaaaaccctgctcgcggacaacgccgtc
cgactggggctcgatcgcccgcgctgccgggataatttagccctgctacagcagcacagc
gagatccgtgacaaggtggtatccctatttgccgatgcgccaccctttccgccatcggac
gacgtggacaaccagctgtacgacggcttcttcagcgacgccgatcgccaggcgatgcaa
attattcgcgccacccagccgcagaacctgccggcgctggatctacgcttcagcgatcgg
cgcatcacgccgctgctgtttcgctaccgcgcccgtaactacccggcgacgctggatgag
agcgagatgcgccgctggcagcagcatcgccaggccatgctgacgccgcagcgcgtacag
gattatctacagacgctggaaatgctgtacaaccgctatgaggatcagccccagcggctg
acgctgctgcgggcgctgtttgattatgcccgtgaattagtaggataa

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