Edwardsiella sp. LADL05-105: AAZ33_07590
Help
Entry
AAZ33_07590 CDS
T04005
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
edl
Edwardsiella sp. LADL05-105
Brite
KEGG Orthology (KO) [BR:
edl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
edl03016
]
AAZ33_07590 (rnd)
Enzymes [BR:
edl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AAZ33_07590 (rnd)
Transfer RNA biogenesis [BR:
edl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AAZ33_07590 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
UBU94972
LinkDB
All DBs
Position
1681895..1683010
Genome browser
AA seq
371 aa
AA seq
DB search
MLKYQLITSSSALKEVCERASACPYIALDTEFVRTRTYYPQLGLVQLYDGETLSLIDPLP
ISDWQPFVDLLRNPQVVKLLHAGSEDLEVFLHDFQTLPQPLIDTQILAAFTGRPLSSGFA
AMVSAYQQVDLDKSESRTDWLARPLSERQCDYAAADVYYLLPMAHKLLAEVEACGWLPAA
LDECQALCRRRAETVEPALAYREMTNAWQLRPRQLACLQLLGEWRLNQARTRDMAVNFVV
REESLWLVARYMPGSMAELSEIGVSGPEIRYHGKALLEIVERAAALEEAQLPPAVERLID
HPGYKQAFKHIKTLVQQVAEQRGLTAELLASRRQINQLLSVQWQLKTEQPELLSGWRGQL
LADGLNGVLKK
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgctaaagtatcagttaattacctccagcagcgcgctgaaagaggtctgtgaacgcgcc
agcgcctgcccgtatatcgcgctggatacggagtttgtccgcacccgtacctactatccc
cagctggggctggtgcagctgtatgacggtgagacgctgtcgctcatcgatccgctgccg
atctccgactggcagccgtttgtcgatctgctgcgtaacccgcaggtcgtcaaactgctg
cacgccggcagcgaagatctggaggtcttcctgcatgatttccagactctgcctcagccg
ctgatcgacacgcagatcctggccgcttttaccggccgcccgctctccagcggctttgcc
gccatggtcagcgcctaccagcaggtcgatctggacaagagcgagtcgcgcaccgactgg
ctggcccgtccgctcagtgagcgtcagtgtgactatgccgcggcagacgtctattacctg
ttgccgatggcgcataagctgctggccgaggttgaggcctgcggctggctgccggcggcg
ctcgacgaatgtcaggccctgtgccgccgccgcgccgagacggtggagccggcgctggcc
taccgggagatgaccaatgcctggcagctgcgtccgcgtcagctggcctgtttgcaactg
ctgggtgagtggcgcctgaatcaggcccgcactcgcgatatggcggtgaacttcgtggtg
cgtgaggagagcctgtggctggtggcgcgctacatgccgggctcgatggccgagctgagc
gaaatcggcgtcagcgggccggagatccgttatcacggtaaggcgctgctggagatcgtc
gagcgtgccgccgcgctggaggaggcgcagctgccgcccgccgtcgagcgtctgatcgac
catccgggctacaagcaggcgtttaagcatattaagacgctggtgcagcaggtggcggag
cagcggggactgacggcggagctgctggcgtctcggcgccagatcaatcagctgctgagc
gtgcagtggcagctgaagacggagcagccagagctgctgagcggctggcgcggccagctg
ttggccgatgggctgaatggcgtactgaaaaaatag
DBGET
integrated database retrieval system
