Edwardsiella sp. LADL05-105: AAZ33_07770
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Entry
AAZ33_07770 CDS
T04005
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
edl
Edwardsiella sp. LADL05-105
Pathway
edl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
edl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AAZ33_07770 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
edl03400
]
AAZ33_07770 (xthA)
Enzymes [BR:
edl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AAZ33_07770 (xthA)
DNA repair and recombination proteins [BR:
edl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AAZ33_07770 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_3
Motif
Other DBs
NCBI-ProteinID:
AKR77585
LinkDB
All DBs
Position
complement(1718344..1719153)
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AA seq
269 aa
AA seq
DB search
MKFISFNINGLRARPHQLAAIVEKHSPDVIGLQETKVHDDMFPLQDLAQLGYHLHYHGQK
GHYGVALLTRMAPLAVRKGFPGDDAEAQRRIIMADIPTELGTLTVINGYFPQGESRDHPI
KFPAKSKFYADLQRYLQDSLSPQNPVLIMGDMNITPRDIDIGIGEDSRRRWLRSGKCSFL
PEERDWLDRLLAWGLVDTYRQANPQYDDRFSWFDYRSKGFDDNRGLRIDLLLASQPLAQR
CTDTGIDYAIRAMEKPSDHAPIWAEFALS
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatctctttcaacatcaacgggctgcgcgcccgtccccatcagctcgcggcg
attgttgagaagcacagcccggacgtgatcggtctgcaggaaaccaaggtacatgacgat
atgtttccgctgcaggatctggcgcagctgggctatcacctgcactaccacggccagaaa
ggccactacggcgtcgccctgctgacccgtatggcgccgctggcggtgcgtaaaggcttc
ccgggtgacgatgccgaagcgcagcggcgcatcatcatggccgatatacccaccgagctg
ggcacgctgaccgtcattaacggctactttccacagggcgaaagtcgcgatcacccgata
aagttcccggcaaagagcaaattctacgccgatctgcagcgctacctgcaggactcactc
tcgccgcagaacccggtgctgatcatgggtgacatgaacatcaccccacgcgatatcgac
atcgggatcggcgaggatagccggcggcgctggctacgcagcggcaagtgttcctttctg
ccggaggagcgggactggctggatcgtctgttggcgtgggggctggtcgatacctatcgc
caggccaacccgcagtatgatgaccgcttctcgtggttcgactatcgctccaaggggttc
gacgataaccgcggtctgcgtatcgacctgctgctggccagtcagccgctggcccagcgc
tgtaccgataccggtatcgactacgcgatccgcgccatggagaaaccctcggatcacgcc
ccgatctgggccgagttcgcactgtcatga
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