Edwardsiella sp. LADL05-105: AAZ33_11895
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Entry
AAZ33_11895 CDS
T04005
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
edl
Edwardsiella sp. LADL05-105
Brite
KEGG Orthology (KO) [BR:
edl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
edl03009
]
AAZ33_11895 (rimO)
Enzymes [BR:
edl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AAZ33_11895 (rimO)
Ribosome biogenesis [BR:
edl03009
]
Prokaryotic type
ribosomal protein modification factors
AAZ33_11895 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
Methyltransf_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AKR78240
UniProt:
A0AAC8VB27
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All DBs
Position
2676799..2678124
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AA seq
441 aa
AA seq
DB search
MSNQSRQPTIGFVSLGCPKNLVDSERILTELRTEGYLVVPTYEDADLVIVNTCGFIDSAV
QESLEAIGEALHENGKVIVTGCLGAKENQIREVHPKVLEISGPHSYEQVLHHVHKYVAKP
QHNPFTSLVPEQGVKLTPKHFAYLKISEGCNHRCAFCIIPSLRGELESRPIGSVLDEAKR
LADSGVRELLVISQDTSAYGADIQHRTGFWNGQPVKTSMLSLCEQLATLGIWIRLHYVYP
YPHVDDVIPLMAQGKLLPYLDIPLQHASPRILKLMKRPGAVERTLERIKRWREICPQLTL
RSTFIVGFPGETEEDFQMLLDFLREARLDRVGCFQYSPVEGAAANELPDQIPDEIKLARF
DRFMQLQQQISAERLQEKVGLTLPVIIDEVDEEGAIGRSMADAPEIDGVVYLNGERGVKP
GDIVSVTIENADEYDMWGSLA
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatcaatcccgccaaccgacaatcggtttcgtctccctcggctgcccgaaaaac
ctggtcgactccgagcgcatcctgaccgagctgcgcaccgaaggctacctggtggtgcct
acctatgaagacgccgatctggtgatcgttaacacctgcggctttatcgacagcgcggta
caggagtctctggaggccatcggcgaagcgctgcatgaaaacgggaaggtcatcgtgact
ggctgcctgggcgccaaagagaaccagatccgggaagtccaccccaaggtgctggagatc
tccgggccgcacagctatgagcaggtgctacaccacgtgcacaaatacgtggccaagccg
cagcacaaccctttcaccagcctggtgccggagcagggcgtcaagctaacgcccaagcat
ttcgcctacctgaaaatctcggagggctgtaaccaccgctgtgcgttctgcattatccct
tccctgcgcggcgagctggaaagccgaccaatcggctcggtgctggacgaagccaagcgt
ctggccgactccggcgtccgtgagctgctggtcatctcgcaggatacctccgcctacggc
gcggatatccagcaccgcaccggcttttggaacggtcagccggtcaaaaccagcatgctc
agcctgtgtgaacagctggcgacgctggggatctggatccgcctgcactatgtttacccc
tatccgcacgtggatgacgttatcccgctgatggcgcagggtaagctgctgccctatctg
gatatcccgctgcagcacgccagtccgcgcattctgaagctgatgaagcgccccggcgcc
gttgagcgtacgctggagcggatcaagcgctggcgcgagatctgcccgcagctgaccctg
cgttcgacctttatcgtcggcttccccggcgagacggaggaggatttccagatgctgctg
gacttcctgcgcgaggcacgcctggatcgcgttggctgcttccaatacagtccggttgaa
ggcgccgccgccaacgaactgcccgaccagatccctgacgagatcaagctggcgcgtttc
gatcgctttatgcagctgcagcagcagatctccgccgagcgtctgcaggagaaagtgggg
ctgacgctgccggtgatcatcgatgaggttgacgaggaaggcgccattggccgcagcatg
gccgatgcgccggagatcgacggtgtggtatacctgaacggggagcgaggggtcaaaccg
ggcgatatcgtcagcgtaaccattgaaaatgccgacgaatacgatatgtggggatctctg
gcctga
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