KEGG   Edwardsiella sp. LADL05-105: AAZ33_12685
Entry
AAZ33_12685       CDS       T04005                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
edl  Edwardsiella sp. LADL05-105
Brite
KEGG Orthology (KO) [BR:edl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:edl02044]
    AAZ33_12685 (tssC)
Secretion system [BR:edl02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AAZ33_12685 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: AKR78365
LinkDB
Position
2852986..2854473
AA seq 495 aa
MSEQNLPENNAAESAALEGGLLDSIITETRMARSDLEKARARDLLGEWVSEVLSGTVTVS
GDVLASIEARIAQIDALLSTQLSAIMHEPDFQRLEGSWRGLHYLVHQSETGTGLKIRMLN
VSRKDLIRDFKSAAEFDQSALFKKVYEEEYGTFGGAPFAAMIGDYEFSNHPEDLFLLEEI
SHVAAAAHAPFLSAASAGMFGLDSLTELSIPRDLAKGFDTVEYAKWKSLRQSEDARYIAL
ALPHVLGRLPYGATTVPVEAFNFEEDVNGKEHGKYLWLNAAYALGTRLTQAYAKYGWCAA
IRGAEGGGLVEGLPAHTFTTDDGEVELKCPTEVAITDRREKELAELGFIALTHCKGTDYA
AFFSTQSVQKPKEYDSDSANANARISCQLQYIMATSRFAHYLKSMVRDKIGSFMSRSECE
YFLNQWISNYVVGSDDAGQDIKAKYPLREARIDVSDIPGKPGFYKAVAYLKPHFQLEGLT
ASLRLVADLPPPAQG
NT seq 1488 nt   +upstreamnt  +downstreamnt
atgagcgaacagaacttgccagagaacaacgccgccgagagcgcggcgttagagggcggc
ctgctggatagcatcatcacggaaacccggatggcgcgtagtgacctggagaaggcgcgg
gcccgggatctgctgggtgaatgggttagtgaggttctgtcgggaacggtgacggtgtcc
ggggatgtgctggccagcattgaggcgcgtattgcccagatcgatgcgctgctttccacc
cagctgtccgccattatgcatgagccggatttccaaaggctggaagggtcatggcgagga
ctgcattacctggtacatcaaagcgagaccggtaccggcctgaagatccgcatgctgaac
gtcagccgcaaagatctgatccgcgactttaagagcgccgccgaatttgatcaaagcgcg
ctgttcaagaaagtctatgaggaggagtacggtacctttggcggcgccccctttgcggcc
atgatcggggattacgagttcagcaaccacccggaggatctgtttctgctggaggagatc
tcacacgttgcggcggcggcccatgcccccttcctctctgccgccagcgccggaatgttc
ggtctggatagcctgaccgagctgtcgatccccagggatctggccaagggctttgatacg
gttgagtatgccaagtggaagtcgctgcgtcagtcggaggatgcccgctatatcgccctg
gccctgccccatgtgcttgggcggctgccttacggcgccacgacggtgccggtagaggca
ttcaactttgaggaggatgtcaacggcaaggagcatggcaagtatctgtggctgaacgcc
gcctatgcgctgggcacccgcctgacccaggcctatgccaaatatggctggtgcgccgcc
atccggggagccgaagggggcggcctggtggagggactgccggcgcacacctttaccacc
gatgatggcgaagtcgaactcaagtgccccaccgaggtggccattaccgatcgccgggaa
aaggagctggccgagctgggatttatcgccctgacccactgtaagggtaccgactatgcc
gccttcttttcgacccagtcggtgcaaaagcccaaggaatatgacagtgactcggccaat
gccaacgccaggatctcctgccagctgcaatatattatggccacctcacgcttcgcccat
tacttaaaatcgatggtccgcgacaaaatcggcagctttatgagccgtagtgaatgtgaa
tattttctcaatcagtggatcagtaattatgtggtcggctcggatgatgccggccaggat
atcaaggcgaaatatccattacgggaagcccgtattgatgtcagtgatattccaggcaaa
ccggggttctataaggcggtagcctatttaaaaccccatttccaactggaggggctgacc
gcgtctttacgtctagtcgccgatctgccaccgccggcgcaaggctaa

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