Edwardsiella sp. LADL05-105: AAZ33_15320
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Entry
AAZ33_15320 CDS
T04005
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
edl
Edwardsiella sp. LADL05-105
Brite
KEGG Orthology (KO) [BR:
edl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
edl03016
]
AAZ33_15320 (truD)
Enzymes [BR:
edl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
AAZ33_15320 (truD)
Transfer RNA biogenesis [BR:
edl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AAZ33_15320 (truD)
Prokaryotic type
AAZ33_15320 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AKR78765
UniProt:
A0AAC8VC29
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All DBs
Position
complement(3434868..3435914)
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AA seq
348 aa
AA seq
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MEFSTLQYLHGRPAATGVVKAFAEDFFVAEDLGFAPDGEGEHVLVRLRKEGCNTQFVAEN
LARFARIAARSVSYAGLKDRHAVTEQWFCLHLPGRDTPDFSQFVLEGCQVLTVARHRKKL
RIGTLRGNQFRLVLRHISDSAEVEERLRRVAAQGVPNYFGEQRFGRGGNNLQQARRWATD
QIRVKERAKRGFYLSAARSALFNRLVSERLAAGCFSRALAGDALQLTGRGSWFVAQEAEL
AALQQRLDAGELRITAALPGDGDGGVAGDAAEFERRVLSEYADLQALLTRERVEPARRAV
LLQPQVMAWNWWDDATVELTFDLPAGSFATSVVRELFCQENPDADLAE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggagttttccacgctgcagtatctgcacgggcgcccggcggcgaccggggtggtcaag
gcgttcgccgaggattttttcgtcgcggaggatctggggtttgccccggacggcgagggt
gagcatgtgctggttcgtctgcgtaaagaggggtgcaatacccagtttgtggcggagaat
ctggcccgctttgcccgtatcgccgcgcgctcggtcagctacgccggcctgaaggatcgt
catgcggtgaccgagcagtggttctgcctgcacctgccggggcgtgataccccagacttc
agccagtttgtgctggaggggtgccaggtcctgaccgtggctcgccaccggaagaagctg
cgtatcggtacgctgcgcggcaaccagttccgcctggtactgcgtcatatcagcgatagc
gccgaggtcgaagagcgcctgcgtcgggtggcggcacagggcgtgcccaactatttcggc
gagcagcgctttggccgcggcggcaataacctgcagcaggcgcgtcgctgggccaccgat
cagattcgggtgaaagagcgcgccaagcgcggtttctatctctccgcggcgcgcagcgcg
ctgtttaatcggctggtgagcgagcggctggcggcgggctgtttttctcgagccctggcc
ggcgatgcgctgcagctgaccggtcgcggcagctggtttgtcgcccaggaggcggagctg
gcggcgctgcagcagcggctggacgccggcgagctgcgcattacggcggcgctgccgggc
gacggtgacggcggcgtcgccggcgatgcggcggagtttgaacgtcgcgtgctgtctgag
tatgctgatctgcaggccctgctgacgcgtgagcgggtagagccggcgcgccgtgcggtg
ctgctgcagccgcaggtgatggcctggaactggtgggatgacgccaccgtcgagctgacc
ttcgatctgcccgccggtagtttcgccaccagcgtggtgcgtgaactgttctgtcaggaa
aaccccgatgcggatcttgctgagtaa
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