Edwardsiella sp. LADL05-105: AAZ33_15905
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Entry
AAZ33_15905 CDS
T04005
Symbol
speF
Name
(GenBank) ornithine decarboxylase SpeF
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
edl
Edwardsiella sp. LADL05-105
Pathway
edl00330
Arginine and proline metabolism
edl00480
Glutathione metabolism
edl01100
Metabolic pathways
edl01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
edl00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
AAZ33_15905 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
AAZ33_15905 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
AAZ33_15905 (speF)
Enzymes [BR:
edl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
AAZ33_15905 (speF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
GKRP_SIS_2
Motif
Other DBs
NCBI-ProteinID:
AKR78854
LinkDB
All DBs
Position
3576729..3578891
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AA seq
720 aa
AA seq
DB search
METLKIAISDNVMQCINTQRNLVALENSDLTDVAAVVLSVQDALGGALEKVEQSAFGLPV
FVAEACDQRLPAEYLPRLTGVFACGDGNQDFYGKQLESAAQKYEAELLPPFFGSLQAYVQ
QGNAAFDCPGHQGGQFFRRHPTGRRFFDYFGEALFRSDLCNADVSMGDLLIHEGAPCAAQ
QHAAKVFNADKTYFVLNGTSSSNKVVLNALLAPGDLVLFDRNNHKSNHHGALIQAGATPV
YLETARNPFGFIGGIDAHCFEEKYLRDLVREVAPARAGEQRPFRLAVIQLGTYDGTIYNA
RQVVDKIGHLCDYILFDSAWVGYEQFIPMMKECSPLLLELNENDPGILVTQSVHKQQAGF
SQTSQIHKKDRHIKGQARYVNHKRLNNAFMMHASTSPFYPLFAALDVNARMHAGDSGKRM
WMECVRVGIETRKLLLKTCQHIRPFIPETVDGRPWDAFDTEEMANDLRFFNFIPGDRWHA
FEGYAEHQYFVDPCKLMLTTPGIDAKSGEYQAFGVPATILANFLRENGIVPEKCDLNSIL
FLLTPAEDMAKMQHLVAQIARFERLLEQDAPLAEVLPSLYRANEARYRGYTLRQLCQEMH
DLYVSHDVKQLQKEMFRKAHFPRVAMNPQQANIAFVRGNVELVSLAQAEGRIAAEGALPY
PPGVLCVVPGEIWGGSVQRYFLALEEGINLLPGFAPELQGVYIQQDEDGRKRAYGYVIKQ
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggaaacattaaaaatagcaatcagcgacaacgtgatgcagtgtattaatacacagcga
aaccttgtggcactcgaaaatagcgatcttaccgacgttgccgccgtggtgctgtcggta
caggatgcgctgggcggcgcgctggagaaggtcgagcagagcgcctttggcctgcccgtc
tttgtcgccgaggcgtgcgatcagcgtctgccggccgaatatctgccgcgcctgaccggc
gtatttgcctgcggcgatggcaatcaggacttttatggcaagcagctggaaagcgcggcg
cagaaatatgaggccgagctgctgccgccgtttttcggcagcctgcaggcctatgtccag
cagggcaacgctgcctttgactgcccggggcatcagggcgggcagttcttccgccgccat
cccaccggccgccggttcttcgactacttcggcgaggccctgttccgctccgatctgtgc
aacgccgacgtctccatgggcgacctgctgatccacgaaggcgccccctgcgccgcccag
cagcatgcggccaaggtgttcaacgccgacaagacctactttgtgctcaacggcacctcc
tcctccaataaagtggtgctcaacgcgctgctggcgcccggtgatctggtcctctttgac
cgtaataaccataaatctaaccaccacggcgcattgattcaggccggcgctacgccggtc
tacctggaaaccgcacgcaacccgttcggtttcatcgggggcatcgacgcacactgcttt
gaagagaaatacctgcgcgacctggtgcgtgaggtcgccccggcgcgcgccggggaacag
cggccgttccgcctggcggttatccagctcggtacctacgacggcactatttacaatgcc
cgccaggtggtggacaagataggtcacctgtgcgactacatcctgttcgactccgcctgg
gtcggctatgagcagttcatcccgatgatgaaagagtgctcgccgctgctgctggagctg
aacgagaacgatccggggatcctggtgacccagtcggtgcacaaacagcaggccggcttc
tcccagacctcgcagatccacaagaaagaccggcatatcaaggggcaggcgcgctatgtc
aaccataaacggctgaacaacgcctttatgatgcacgcctccaccagcccgttctacccg
ctgttcgccgccctggacgtcaacgcccgcatgcacgccggcgacagcggcaagcgcatg
tggatggagtgcgtccgggtgggcattgaaacccgtaagctgctgctgaagacctgccag
cacatccgccccttcatcccggagaccgtggacggccgcccgtgggacgccttcgacacc
gaggagatggccaacgatctgcgcttctttaacttcatccccggcgatcgctggcacgcc
tttgagggctatgccgagcatcagtactttgtcgacccgtgcaagctgatgctgaccact
ccgggcatcgacgccaagagtggcgaataccaggcctttggggtgccggcgaccattctg
gccaacttcctgcgcgaaaacggcatcgtgccggagaaatgcgacctgaactcgatcctg
ttcctgctgaccccggcggaggacatggccaagatgcagcatttggtggcccagatcgcc
cgcttcgagcgcctgctggagcaggacgccccgctggccgaggtgctgccgtccctctac
cgcgccaacgaggcgcgctaccgcggctacaccctgcgtcagctgtgccaggagatgcac
gacctgtacgtcagccacgacgtgaagcagctgcagaaggagatgttccgcaaggcgcac
ttcccacgggtggcgatgaacccgcagcaggccaacatcgcgttcgtgcgcggcaacgtc
gagctggtctccctggcgcaggccgaaggccgcatcgcggcggaaggggcgctgccgtac
ccgccgggggtgctgtgcgtggtgccgggcgagatctggggcggctcggtgcagcgctac
ttcctggcgctggaagagggcatcaacctgctgccgggcttcgcgccggagctgcagggg
gtctacatccagcaggatgaggatggtcgcaagcgcgcctatggctatgtgatcaagcag
taa
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