Enterococcus dispar: PML78_02550
Help
Entry
PML78_02550 CDS
T08868
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
eds
Enterococcus dispar
Pathway
eds03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eds00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PML78_02550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eds03019
]
PML78_02550
03400 DNA repair and recombination proteins [BR:
eds03400
]
PML78_02550
Enzymes [BR:
eds01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PML78_02550
Messenger RNA biogenesis [BR:
eds03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PML78_02550
DNA repair and recombination proteins [BR:
eds03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PML78_02550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WCG33587
LinkDB
All DBs
Position
complement(541160..542548)
Genome browser
AA seq
462 aa
AA seq
DB search
MALEDSLKQYFGFDSFRSGQKEVIESLLSGQDVLGILPTATGKSLCYQLPSYLTSGITIV
VSPLISLMEDQVSQLNSKKIQAVALNSQLTAAEKEFVLWHLSDYKFLFISPEMLWQKKIL
QLLKRQKIAFFVIDEAHCVSLWGIDFRPEYRQLGKIKAFLENPVTLALTATATPFVQSDI
AKLLLKEDYELIQRSVDRKNIALFVQQTDDKFAQLTDLLKKLSGPGIIYCATKKTVETLY
RKLKVHYNIGYYHGGLNSSERSRLQLQFQSNHLDILVATNAFGMGIDKSDIRFIIHYDLP
DSIENYVQEIGRAGRDGAASQAVLLYQKNDEKIHHYFKQMRQDERSGFQQLLGRKMAHES
SELQSKWIDLSQSIGEKEVLAALAVNEQIKGEKLTQMLAYINLATCRREFILENFAEKMQ
TKPSDCCDNDGLVLKTSQVPDKQNHQLVSWQEIFLKLFKEND
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcattagaagatagtttaaaacaatattttggttttgacagttttcggagcggacaa
aaagaagtcattgaaagtttactttctggtcaagatgtcttagggattttgcctactgcg
accggtaaaagcttgtgctatcaattaccgagttatttaacgtctggaataacaattgtt
gtttcgccactaatttcattaatggaagaccaagtcagccagctcaacagtaaaaaaatt
caagcagtagctttaaatagccagttgactgctgcggaaaaagaatttgttttatggcac
ttatctgattataaatttttatttatcagtccagagatgctctggcaaaagaaaatttta
caactgttaaaacggcaaaaaattgctttttttgtaattgatgaagcccactgtgtttct
ttgtgggggattgattttaggccggaatatcgccaattagggaagataaaagcattttta
gaaaatccggtaacattagccttaactgctacagctactccttttgtacagagtgatatt
gctaaactattattaaaagaagactatgaactgatccaacgatcagttgatcgcaaaaat
attgccctttttgttcaacaaacagatgacaagttcgcccaattaactgatttattaaaa
aaattgagcggtcctggtattatttattgtgcaacaaaaaaaactgtggagactttatat
cgcaagttaaaagtgcattataatattggctattatcatgggggactaaacagtagtgaa
agaagtcgtctccaattgcaatttcaaagcaatcacttggatattttggtagctacaaat
gcgtttggcatgggaattgataaaagtgatattcgttttatcattcactatgatttacct
gacagtatcgaaaactatgtacaagagattggtcgtgccggacgtgatggtgccgcgagc
caagcagttttactttatcaaaaaaatgatgagaaaattcatcattacttcaaacaaatg
cggcaagatgaacgtagtggttttcagcaattattaggacgaaaaatggcccatgaatct
agtgagctacaaagtaaatggatagatttaagtcaaagtattggcgaaaaagaagtgtta
gccgctttggcggttaatgagcagattaaaggtgaaaaattaacgcaaatgttggcttat
atcaaccttgcgacgtgtcgtcgagaatttattttagaaaattttgccgaaaaaatgcaa
acaaagcccagcgattgctgtgacaatgatggcctggtgttaaaaactagtcaagtacca
gacaaacaaaatcatcaattggtgagttggcaggagattttcctaaaattatttaaagaa
aacgattga
DBGET
integrated database retrieval system
