Enterococcus dispar: PML78_06185
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Entry
PML78_06185 CDS
T08868
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
eds
Enterococcus dispar
Brite
KEGG Orthology (KO) [BR:
eds00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eds03019
]
PML78_06185
Messenger RNA biogenesis [BR:
eds03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PML78_06185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
HDOD
Motif
Other DBs
NCBI-ProteinID:
WCG34270
LinkDB
All DBs
Position
complement(1319642..1320586)
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AA seq
314 aa
AA seq
DB search
MKKLRDLTVDEEFQAFLLIKNADVRLAKNGKKFIAFTFQDTTGTIDGKFWDASEEEINKF
EAGKVVALQGKRELYNGNPQVKIIHMRLARSDEPSEPTQYMERAPLKKEEMEEEINQTLF
EIINPHWNRIVRFLLNKYQKEFFDFPAAKRNHHAFAGGLAYHTVSMLRLAKAIVKEYPEL
NPSLLYAGVILHDLGKVIELSGPMSTEYTLVGNLVGHLVLVDEEITKACMALKFDENEED
IVVLRHMVLAHHGLLEYGSPVRPRIMEAEILHQIDNLDASMQMMLTSLRQTQPGNYSDRI
FGMDNRSFYLPKDV
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattaagagatttaacagtggatgaagaatttcaagcctttctattaatcaaa
aatgccgatgtgcgtttagctaaaaatggcaaaaagtttatcgcatttactttccaagat
accacgggcacaattgacggcaaattttgggatgcctctgaagaagaaattaataaattt
gaagcaggaaaagtcgttgctttacaaggcaagcgtgaattgtataatggcaatccgcaa
gtcaaaattattcatatgcgtctcgcacgttctgatgaacccagtgagccaacccagtat
atggaaagagcacctttgaaaaaagaggaaatggaagaggaaattaatcaaaccttgttt
gagattattaacccccattggaatcgaattgtgcgttttctattaaataaataccaaaaa
gaattctttgattttccagccgccaaacgcaaccaccacgcttttgctggcgggcttgca
tatcacacggtttccatgttgcgtttagccaaagcaatcgttaaagaatatccagaatta
aacccttctttgctatatgcaggcgttattttacatgatttagggaaagtgattgaacta
tcagggccaatgtcaacagaatatacactagtaggaaacttagtcggtcatttggtttta
gtagatgaagaaatcaccaaagcttgtatggcattgaaatttgatgaaaatgaagaagat
attgtggttttgcgccacatggtgttggctcatcacggtcttttggagtacggttctcct
gtccgaccacgaattatggaggcggaaatcttacatcaaattgataatttagatgcttca
atgcagatgatgttgacttctttgcgtcaaacccaaccgggaaattattccgatcgtatt
ttcggcatggataatcgcagtttttatctgccaaaagatgtttaa
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