Enterococcus dispar: PML78_08485
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Entry
PML78_08485 CDS
T08868
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
eds
Enterococcus dispar
Pathway
eds03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eds00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PML78_08485 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eds03019
]
PML78_08485 (recQ)
03400 DNA repair and recombination proteins [BR:
eds03400
]
PML78_08485 (recQ)
Enzymes [BR:
eds01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PML78_08485 (recQ)
Messenger RNA biogenesis [BR:
eds03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PML78_08485 (recQ)
DNA repair and recombination proteins [BR:
eds03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PML78_08485 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
zf-CXXC
AAA_2
Motif
Other DBs
NCBI-ProteinID:
WCG32233
LinkDB
All DBs
Position
1826207..1827952
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AA seq
581 aa
AA seq
DB search
MDVLTQLLKEKFGYESFRPGQLELIQKVLRNENVLGIMPTGGGKSICYQLPALLLDGLTL
VVSPLISLMKDQVDALNEMGIAATFVNSSLSQAEVSIRLKDAAFGKYKLVYVAPERFEMF
SFKQLLQQEKISLIAVDEAHCISQWGHDFRPSYLQLAQEIKALPQRPAVIALTATATPQV
AKDIESSLEIPANNKVQTGFARENLAFQVVKDAKDSYLLEYLRVNDQQAGIIYASTRKEV
ERLYHLLKSKKIEVGYYHGGLTEAQRSAAQEAFLFDEIKVMVATNAFGMGINKSNVRFVI
HAQTPGNIESYYQEAGRAGRDGLPSEAILMYAPQDLQVQQFFIDNSEMEIDYKQKEYLKL
REMSQYAHTEMCLQRYILRYFGEDGPDCGRCSNCLDEREVEEITLDAQKVLSCVKRMGER
FGKALISKVLTGSKDQKISQWHFEKLSTYGLMKDWSQKDVSQLIDFLTAAGYLTPTEGQF
PLLKISNSGKKVLLGQQKVMRRAQVVKKLAPDNALFEKLRQLRLELASKQNLPPYVIFSD
KTLYELAEIQPQTTLEMLQIKGVGENKLKKYGAAFLELLQK
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
gtggatgttttaacccaattattaaaagaaaagtttggttacgaaagctttcgtccgggt
caattagaattgattcaaaaagtgttgcgtaatgaaaatgttttaggcattatgccaacc
ggtggcgggaagtcgatttgttatcaattgccggcattattattagatggcttaacctta
gtggtctcgcctttgatttctttaatgaaagatcaagtggatgcgttaaatgaaatgggt
attgcagctacttttgttaatagtagtttatctcaagctgaagtaagtatacgcttaaaa
gatgcagcctttggcaaatataaattagtttatgttgcgccggaacgttttgaaatgttt
tcgtttaagcaacttttacagcaagaaaaaattagtttaattgctgtggatgaagcccat
tgtatctcgcaatgggggcatgattttcgcccgagttatttgcaattggcccaagaaatc
aaagcgttgccccaacgtccggctgtgattgccttaactgcgacagcaacgccccaagtc
gccaaagatattgaaagcagtttggaaattccggcgaataataaagtccaaaccggtttt
gcgcgggaaaatttggcttttcaagtagtaaaggacgctaaagacagctatttattggaa
tatttgcgggtcaatgatcaacaagcgggtattatttatgccagtaccagaaaagaagtt
gagcgcttataccaccttttaaaaagtaaaaaaattgaagtcggttattatcatggcggt
ttaaccgaagcgcaacgctcagcagcgcaagaagcttttttatttgatgaaattaaagta
atggtagcaacgaatgcttttgggatggggattaataaaagtaacgtccgctttgtcatc
catgcgcaaacaccaggcaatattgaatcctactatcaagaagccggcagagcggggcgc
gatggactgccgagtgaagccatcttgatgtacgcaccgcaagatttgcaagtacagcag
ttttttattgataattctgagatggaaatcgactacaagcaaaaagaatatttgaagtta
cgagaaatgagccagtatgctcatacagaaatgtgtttgcaacgctacattctgcgctat
tttggggaagacggcccagattgtgggcgttgtagtaactgcttagatgaaagagaagtt
gaagagattacattagatgcccaaaaagtgttatcttgtgtcaaacgtatgggtgaacgt
tttggtaaagcacttattagtaaagttttaacgggttcaaaagatcaaaaaattagccaa
tggcattttgaaaagctatcaacttacggcttaatgaaagactggagtcaaaaagatgtt
agtcagttaattgattttttgacagcagcaggttatttaacccccacagaaggacaattt
cctttattgaaaatttccaatagtggcaaaaaagtcttactggggcaacaaaaagtgatg
cgtagagcccaagtcgtgaaaaaattggcacccgataatgcattatttgaaaaactgcgc
cagttgcgcttggaattggcttccaaacaaaatttaccgccttatgtcattttttctgat
aaaacgttgtatgaactagctgagattcagccacaaaccaccttagaaatgttgcaaatt
aaaggggtaggggaaaataaattgaaaaaatacggcgcagcatttttagaactcctacaa
aaatag
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