Enterococcus dispar: PML78_09875
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Entry
PML78_09875 CDS
T08868
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
eds
Enterococcus dispar
Pathway
eds03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eds00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PML78_09875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eds03019
]
PML78_09875
03009 Ribosome biogenesis [BR:
eds03009
]
PML78_09875
Enzymes [BR:
eds01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PML78_09875
Messenger RNA biogenesis [BR:
eds03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PML78_09875
Ribosome biogenesis [BR:
eds03009
]
Prokaryotic type
rRNA helicases
PML78_09875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WCG32499
LinkDB
All DBs
Position
2107064..2108614
Genome browser
AA seq
516 aa
AA seq
DB search
MKFNELNLSPELLQSVERAGFEEATPIQAATIPLALAGRDVIGQAQTGTGKTAAFGLPML
EKIDTNDHSLQGLIIAPTRELAIQTQEELYRLGRDKKIRVQAVYGGADIGRQIRGLKDRP
HIVVGTPGRMLDHINRHTLKLGTVRTLVLDEADEMLNMGFLEDIEKIISQVPAERQTLLF
SATMPAAIKNIGVKFMKNPEHVQIEAKEMTADLIDQYYVRAKDFEKFDVMTRLLDVQTPD
LAIVFGRTKRRVDELARGLEARGYRAEGIHGDLSQQKRMSVLRAFKSGQLDILVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKGGMSVTFVTPNEMSYLHVIENLTKK
RMSTLRPPTEKEAFKGQLGAAVQQIEDGLKENGLERYMTTAEKLIEGYDPEVLVALLLKT
IAKDPADAVPVKITPERPLPSGKKGFNKNSRRGGSGGGNNRNRKDGGNYRNKNKNSHYNK
EGQKRNDRRRDDRRRDDRRQNDGGGKRNFVIRNNQD
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttaacgaacttaatttatcacctgaattattgcaatctgtcgagcgggccggc
tttgaagaagcaacccctattcaggcagcaacaattccattagcattagcaggtcgcgat
gtaatcggccaagcacaaactggtactggtaaaacagctgcttttggtttaccaatgttg
gaaaaaattgataccaacgaccattcattgcaaggacttataattgcacctactcgtgaa
cttgcgattcaaacgcaagaagaattgtaccgtttaggacgggacaaaaaaatccgcgta
caagccgtttacggtggcgctgatattggtcgccaaattcgcggcttaaaagatcgtccc
catatcgttgttgggacaccgggtcgaatgctagaccacattaaccgtcacacattgaaa
ttaggaactgttcggacattagtcttagacgaagctgacgaaatgttgaacatgggcttt
ttggaagatattgaaaaaattatctcccaagttcctgcagaacgccaaacattactattt
tctgcgacgatgcctgcagcaattaaaaatattggcgtaaaattcatgaaaaatcctgaa
catgttcaaattgaagctaaagaaatgactgctgatttgattgatcaatattatgttcgg
gccaaagattttgaaaaattcgatgttatgacacgtttattagatgttcaaacaccagat
cttgcgattgtgtttggtcggacaaaacgtcgggtagacgaattagcacgtggcttagaa
gctcgtgggtatcgcgctgaaggaattcatggcgatttatcacaacaaaaacggatgagt
gttttacgcgcttttaaatcgggtcaattagatattttagttgctaccgacgtggctgcc
cgcggattggatatttctggtgtcacacatgtttacaactatgatattccacaagatcct
gaaagttatgttcaccgtatcggccgtactggtcgtgccggtaaaggcggaatgtctgtt
acttttgtaacaccaaatgaaatgagttacttgcatgtcattgaaaacttaacgaaaaaa
cggatgtcaacattgcgtcccccaactgaaaaagaagctttcaagggtcaattaggtgct
gcggtacaacaaattgaagatggcttaaaagaaaatggtttggaacgttacatgactact
gcagaaaaactgattgaaggttatgacccagaagttttagtcgctttgttactaaaaacg
attgccaaagatccagcagacgctgttccggttaaaattacaccagaacgtcctttgcca
agtggtaaaaaagggtttaataaaaatagccgtcgtggtggtagtggtggcggaaacaac
cgcaaccgtaaagatggtggcaattaccgcaataaaaacaaaaacagccattataacaaa
gaaggtcaaaaacgcaacgaccgtcgtcgtgatgaccgtcgtcgtgatgaccgtcgacaa
aatgatggtggcggaaaacgcaacttcgttattcgcaacaaccaagattaa
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