Enterococcus durans: LIU_07095
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Entry
LIU_07095 CDS
T04048
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
edu
Enterococcus durans
Pathway
edu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
edu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LIU_07095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
edu03019
]
LIU_07095
03400 DNA repair and recombination proteins [BR:
edu03400
]
LIU_07095
Enzymes [BR:
edu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LIU_07095
Messenger RNA biogenesis [BR:
edu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LIU_07095
DNA repair and recombination proteins [BR:
edu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LIU_07095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
TniB
Motif
Other DBs
NCBI-ProteinID:
AKZ48184
LinkDB
All DBs
Position
1486511..1488265
Genome browser
AA seq
584 aa
AA seq
DB search
MTKKYFGYDEFRPGQREIIQKVMEHEDVLGIMPTGSGKSVCYQLPALMLDGLTIVVSPLI
SLMKDQVDAANQLGIAATFINSSLNGYETARRFQELEQREIQLLYVAPERFIMPDFIRSM
QHWNVQLLAIDEAHCISQWGHDFRPSYLQMAEKLNELIQRPIIVALTATATIAVAEDIKR
LLKIPIKNHIQTGFARENLRLQVIKDQKKEQYLVEYLRMNQKQSGIIYAATRKEVDRIYH
LLKKFGFNAGRYHGGMSERERTEMQEAFLYDRVELLVATNAFGMGINKSNIRFVIHYQIP
GSLEAYYQEAGRAGRDGLLSDAILLFAPQDIQIQKFFIQQSQREDSQKQKEYEKLKAMTE
YVYIEDCLQQYILAYFGEDGVPCERCGNCLDDRELIDVTKETQMVLSCIKRMGENYGKQM
LMKVLAGSKEQKVKNFGFDRLSTYGLLKKYAQKDILQLIEFLISGGYLLSVSGEYPVLKV
TESGIAVLTGKKQVFKKEPKKVVQLSDEAADSLFEALRELRTDLASEAGVPPYVVFSDST
LKEMSQQRPQNRLAFLQIKGVGQSKLDKYGEAFLAVIKEAQSEK
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
attactaaaaaatattttggctatgacgaatttcgcccagggcaaagggaaatcattcaa
aaagtgatggaacatgaagatgtgctgggtatcatgccgacaggaagtgggaaatcggtg
tgctatcagttgccagcgttgatgctagatggtttgacgatcgtcgtttcacccttgata
tccctcatgaaagatcaagtagatgcggctaaccagttagggatagctgcaacatttatc
aatagttcgttgaatggctatgaaacagcaagacgtttccaagaacttgaacagagggag
atccagttgctctatgttgcacctgaacgctttatcatgccagatttcattcgttcgatg
caacattggaatgtccaactgcttgccattgatgaagcacattgtatttcccaatggggg
catgatttccgtccaagttaccttcaaatggcagaaaagttgaatgagttgatccaacgg
ccaatcattgttgcattaacagcaactgcaacgatagctgtagccgaagatatcaaaaga
cttttaaagattccaatcaaaaatcatatccaaaccgggtttgctcgcgaaaatctacgg
ttgcaagtgatcaaggatcaaaaaaaagaacaatatttggtcgaatatctgcgtatgaat
cagaaacaatccggcatcatctatgcagcaacacgcaaagaagttgaccgtatctatcat
ttattaaaaaagtttggtttcaatgctggtaggtatcatggtggcatgagtgaacgggaa
cgaacggaaatgcaagaagcttttctgtacgaccgcgtagagttattggtggctaccaat
gcttttggaatggggatcaataaaagcaatatccgctttgtcatccattatcaaatacca
ggttctttggaggcgtattatcaagaagcaggtagagcgggaagagatggtcttctaagt
gatgctatcttgttatttgcaccgcaagatatccagatccagaaattttttatccagcaa
tcacaacgggaagattctcaaaagcaaaaagaatatgaaaaattaaaagctatgaccgag
tatgtctacattgaggattgtttgcagcaatatatcttagcttattttggagaagatggt
gtaccttgcgagcgttgcggtaactgtttagatgatcgagagttgatcgatgttacgaag
gaaacacagatggttttatcctgtatcaaacgaatgggcgaaaactatgggaagcagatg
ttgatgaaagtgttagctggatcgaaggagcaaaaagtgaaaaacttcggatttgatcga
ctttctacgtacggtttattaaagaaatacgcgcaaaaagatatcttgcagctgatcgaa
ttccttatctctggtggttacttgctctctgtgagtggagagtaccccgttttgaaagtc
acagagtcaggtatcgctgttcttactggaaaaaaacaagtatttaagaaagaaccaaag
aaagtagttcaactttcagatgaagctgcagacagtctgtttgaagcattacgagaactg
cgaacagacttagcttctgaagctggtgttccaccatatgtcgttttttctgattcgacg
ttaaaggaaatgagccaacaaagaccacaaaaccgactggcatttctgcaaataaaaggt
gtcggtcaaagtaaattagataaatacggagaagcattcctagccgttatcaaagaagca
caaagcgaaaaatga
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