Enterococcus durans: LIU_13095
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Entry
LIU_13095 CDS
T04048
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
edu
Enterococcus durans
Pathway
edu03420
Nucleotide excision repair
edu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
edu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LIU_13095
03430 Mismatch repair
LIU_13095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
edu03400
]
LIU_13095
Enzymes [BR:
edu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LIU_13095
DNA repair and recombination proteins [BR:
edu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LIU_13095
MMR (mismatch excision repair)
Other MMR factors
LIU_13095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
DEAD
AAA_12
ResIII
PhoH
AAA_22
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AKZ49208
LinkDB
All DBs
Position
complement(2782547..2784760)
Genome browser
AA seq
737 aa
AA seq
DB search
MGKAINQGNEKEILRLQRELKHWEKKYSKLQQIFRMQEEIIASYEAAYGEAPGLIDEEKE
DNGSHSFFDMMEKRSYNRFNQEQKAAITYNMEKNLRIIAGAGSGKTQTICAKAVYLMTQE
QVEEQRILMITFTRNAANELKKRVDNFSQCKTNVHIGTFHSIFFRLYNDIQRRFPEITAT
GIQGEFSKDTSYKINGILQQLIRKYNLYAFDQSGEKTISARLDYWQNMNLSIEEIVEVIQ
DKFDSLEQKATKPISERMKYLMSELQEQKKEQKLFEFNDVLQNLKSALQDEAVRRYVGEK
YDYLFIDEFQDTNPLQWEIVRLITKDSHIKLIVVGDDDQSIYGFRGSEPSYIKNFDQEYP
TKTLFLLTNYRSRAAIVQGANRLITFNKNDRIPKAMVPAQKEAGIMSALSFENTQTESKW
IIKQIQSFIKSNGKYKESIVLYRSLSQTQQLVQDLLQTEIPFVLEADGQYEGVFGIRTFQ
QFYQKLVLWYEAPTQQKKNHAYKQLLHQLMMNCYLKRAECDFFFSNENKKKDIINYLLAV
RPNMKSKEKELRSFIGEINALEKNENHKIESLIKGFLKLLKPAKEMDGTEKEWLSETIKK
YPTLTQLMGLEKEIQVLAKQLKIRLTAYRQGKLDALCIQSIHRSKGLSYRNVFLIGCNEG
LIPYNGATEKNALSNKQIKAEHLTTIEEERRLFYVAMTRARNRLYLCIPLMKGTRRLKPS
RFIRETGCKIKKQSIYN
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagctatcaatcaaggaaacgaaaaagaaattcttcgtttgcaaagagaactc
aaacattgggaaaaaaagtacagcaagctccaacaaattttccggatgcaagaagaaatc
attgcaagttatgaggcagcatatggcgaagctccaggcctgatcgacgaagaaaaagaa
gataatggaagccattcatttttcgatatgatggaaaaacgttcgtataatcgatttaat
caagaacaaaaagcggcaatcacctacaacatggagaaaaatttgcggattattgctgga
gccggaagtggcaagacgcagacgatttgtgcaaaggccgtttacttgatgacacaagaa
caagtagaagagcaacggatattgatgattacttttacaaggaatgcggcaaatgaatta
aaaaaacgggtagataattttagtcaatgtaagactaatgtgcatatcggcacatttcac
agcatttttttccgtttgtacaatgacatccaaagacgttttcctgaaataacggcaaca
gggatacaaggggaattttctaaagatacttcttataaaatcaatggtatactccaacag
ctgatccgcaagtataatctatatgcatttgatcagtcgggagaaaaaacgatttcggca
agattggattattggcagaatatgaatttgtcgattgaggaaatcgttgaagtgatccag
gacaaatttgactcgcttgaacaaaaagcaacaaaaccgatttctgagcgaatgaagtat
ctcatgtctgaactccaagaacaaaaaaaagaacagaagctatttgaattcaatgatgtg
ttgcaaaatttaaaatctgcactacaagatgaagcagttagacgatatgtcggtgaaaaa
tatgattacctatttatcgatgaatttcaagacacgaatccattgcaatgggaaatcgta
cgtttgatcacgaaagatagccatatcaagttgatcgtagtcggggatgatgatcaaagt
atctatggatttagagggtcagagccttcttatatcaaaaattttgatcaagagtacccc
acaaagaccctgtttttactgactaattatcgttcccgcgctgcaatcgttcaaggtgcg
aatcgattgatcacattcaataagaacgatcgcattcccaaagcaatggttccagcacaa
aaagaagctggtattatgagtgctctgtcttttgaaaatacacaaactgaaagtaaatgg
atcatcaaacagatccagtcctttataaaaagcaatgggaagtataaagagtcgatcgtg
ttatatcgttcgttatcacaaacgcaacagttagtccaagacctcctacaaacagaaatt
ccatttgtattggaagcagatgggcaatatgaaggagtatttggtatacggacttttcaa
cagttttaccagaaattagtactttggtacgaagcgcctacgcagcagaaaaaaaatcat
gcgtataagcagttattgcatcagctaatgatgaactgctatctgaaaagagctgaatgt
gatttctttttttcaaatgagaataagaaaaaagatatcataaactatctcttggcagtg
agacctaatatgaaatcaaaggaaaaagaactacgctcttttattggagaaatcaacgct
cttgaaaaaaatgagaaccataagattgaatcattgataaaaggttttctaaaattgctg
aaacctgctaaagaaatggatggtacggaaaaagaatggttgtccgagactatcaaaaaa
tatccgacactgactcaactaatgggcttagagaaagaaatacaagtactagcaaagcaa
ttaaaaatccgcctgactgcttatcgtcaaggaaaactggatgcattgtgcatccaaagc
attcatcgaagtaaaggattgagctatcggaatgtctttttgattggttgcaatgaagga
ctgatcccttataatggagcaactgaaaaaaatgctttaagcaacaaacagataaaggca
gagcatctaactactatagaagaagaacgacgcctcttttatgtggcgatgacaagagca
aggaatcgactgtatctgtgtattcctttgatgaagggaacacgtcgattaaaaccctca
agatttattagagaaactggttgtaaaattaaaaaacaatcgatatataactga
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integrated database retrieval system
