Candidatus Enterococcus dunnyi: A5889_002965
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Entry
A5889_002965 CDS
T11910
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
edun Candidatus Enterococcus dunnyi
Pathway
edun03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
edun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A5889_002965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
edun03400
]
A5889_002965
DNA repair and recombination proteins [BR:
edun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A5889_002965
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A5889_002965
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
Kinesin
AAA_30
AAA_19
AAA_22
AAA
AAA_7
AAA_5
AAA_16
AAA_25
TEX51
Fy-3
Motif
Other DBs
NCBI-ProteinID:
WYJ95417
UniProt:
A0A200JDH0
LinkDB
All DBs
Position
3153774..3155771
Genome browser
AA seq
665 aa
AA seq
DB search
MIERETSNTFDLVSKYQPDGDQPEAIKRLTEGIEGGEKAQILLGATGTGKTFTISNVITE
VNKPTLVIAHNKTLAGQLYGEFKEFFPNNAVEYFVSYYDYYQPEAYVPSSDTYIEKDASI
NDEIDKLRHSATSSLLERNDVIVVASVSCIFGLGDPKEYSEQVVSIRVGMEMDRSQLLTN
LVNIQFERNDIDFQRGRFRVRGDVVEIFPASRDEHALRVEFFGDEIERIREVDALTGEII
AETEHVAIFPATHFVTNEDHMEHAISQIQAELDERLKVLRSENKLLEAQRLEQRTNYDIE
MMREMGYTSGIENYSRHMDGRSEGEPPYTLLDFFPDDFLLVIDESHVTMPQIRGMYNGDR
ARKQMLVDYGFRLPSALDNRPLRLEEFEEHVHQIVYVSATPGPYEHEQTDTVIQQIIRPT
GLLDPLIEVRPIMGQIDDLVGEINERVAKNQRVFVTTLTKKMSEDLTDYFKELGIKVKYL
HSDIKTLERTEIIRDLRLGEFDVLVGINLLREGLDVPEVSLIAILDADKEGFLRSERSLV
QTIGRAARNSDGRVIMYADKITDSMQKAMDETARRRSIQEKYNEEHGIVPKTIIKEIREL
ISISKANNEKNEPFKIDKSYHEMTRQEKADLLMKLEKEMKDAAKALDFETAATLRDTILE
LKAAD
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaagagaaacctccaatacatttgacttagtctcaaagtatcagccggatggt
gatcagccggaggcaatcaagcgattgacagaagggatcgaaggcggcgagaaagctcag
attctacttggagcgacaggaacaggtaagacatttaccatttctaatgtaatcacagag
gtcaataagccaactctggtcatcgcgcataataagacattagctggacagctttatggt
gaattcaaagaattcttcccgaataacgcggtcgagtattttgtcagttattatgattat
taccagccagaggcttatgttccttccagcgatacatatatagaaaaagatgccagtatc
aatgatgaaatcgataaattacgtcactcagcaacaagctcattattagaaagaaatgat
gtgatcgttgttgcttcggtttcttgtatctttggtttgggagaccctaaagaatatagt
gaacaagttgtatcgattcgtgtaggtatggagatggatcgtagtcagttgttgacgaac
ttggtcaatattcaatttgagcgtaatgatattgactttcagcggggccgttttagagtt
cggggagatgtggttgaaatttttccggcatctagagatgagcatgcgttaagagtcgaa
ttttttggtgatgagatcgaacgaatcagagaagtggatgcgttgacgggagaaataatt
gcagagacagagcatgtagcaattttcccagcaactcactttgtgacgaatgaagatcat
atggagcatgctatttctcagattcaagcagaattagatgagcgattaaaagtattacgt
agtgaaaataaattattggaagcacaacgcttggaacaacgaacgaattatgacattgaa
atgatgcgtgaaatgggctacacatccggcatcgagaattactcccgtcacatggatggt
cgttcagaaggggagccgccatatacattactggatttcttcccagatgactttctgtta
gtgattgatgaatcacatgtgacgatgcctcaaatcagagggatgtacaatggagaccga
gcaagaaaacaaatgctggtcgactatggtttccgtttaccaagtgcattggataatcgc
ccgcttaggttggaagaatttgaagagcatgttcatcaaatcgtgtatgtttcagcaact
ccagggccatatgaacatgaacagacggatactgtgatccagcagatcattcgtccaact
ggcttactagatccattgatcgaagttcgtccgatcatgggacaaatcgatgatctggtt
ggtgaaatcaatgaacgtgtagcgaagaaccaacgggttttcgttactacactcacgaaa
aaaatgtcagaggatctaacagattacttcaaagaattagggatcaaggtcaagtatctg
catagtgatatcaaaacattggaacgaacggagatcattcgagatctacgtttaggagaa
ttcgatgtgttagtcgggatcaacttactaagagaaggacttgatgtaccggaagtatca
ttgatcgctattttagatgctgataaagaaggcttcttgagaagtgagcgttctcttgtt
cagacgatcggaagagcggcgcggaattcagatggtcgagtgatcatgtacgcggataaa
ataactgattcgatgcaaaaagcgatggatgaaacagctcgtcgtcgttcgatccaagag
aaatataatgaagaacacgggatcgtgccgaaaacgatcatcaaagagattcgggaattg
atttcgatttctaaggcgaacaatgaaaagaatgaaccattcaagatcgataagtcttac
catgaaatgactcgtcaggaaaaagcagatttattgatgaaactggaaaaagaaatgaaa
gatgctgcaaaagcgctggactttgaaacagccgctacgctgagagatacgatcttagag
ctaaaagcagcagattaa
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integrated database retrieval system
