Edwardsiella sp. EA181011: QY76_02210
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Entry
QY76_02210 CDS
T03991
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
edw
Edwardsiella sp. EA181011
Pathway
edw03420
Nucleotide excision repair
edw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
edw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QY76_02210 (uvrD)
03430 Mismatch repair
QY76_02210 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
edw03400
]
QY76_02210 (uvrD)
Enzymes [BR:
edw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QY76_02210 (uvrD)
DNA repair and recombination proteins [BR:
edw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QY76_02210 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
QY76_02210 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
DUF4391
Motif
Other DBs
NCBI-ProteinID:
AKM46304
LinkDB
All DBs
Position
complement(489270..491429)
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AA seq
719 aa
AA seq
DB search
MDVSDLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLAVENCSPFSIMAV
TFTNKAAAEMRHRIEALIGTSQGGMWIGTFHGLAHRLLRAHHLDAGLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPARQGMWYINGKKDDGLRPQHIESYGNPVEQTWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLHKPQILEHYRARFNNILVDEFQDTNRIQYAWIRMLAGDS
GRVMIVGDDDQSIYGWRGAQVENIQKFLDDFPGAQTIRLEQNYRSSGNILRAANALIENN
DGRLGKKLWTEDGEGEPISLYCAFNELDEARFVVNRIKAWQDNGGALKECAILYRSNAQS
RVLEEALLQAATPYRIYGGMRFFERQEIKDALAYLRLLSNRNDDAAFERVVNTPVRGIGD
RTLDVVRQTARDRQLTLWQATRALLQEQVFPGRAANALRRFLELIEALAQDSDDLPLHVQ
TDRVIRDSGLRQMYEQEKGEKGQTRIENLEELVTATRQFSYEDDDDLSPLQAFLSHAALE
SGEGQADAYQDAVQLMTLHSAKGLEFPLVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYV
GVTRAMRKLTLTYAESRRLYGKEVYHRPSRFVGELPETCVEEVRLRASVTRPVSHARMGT
PLSQSDSGYRLGQRVTHAKFGEGTIINLEGSGEHTRLQIAFKGEGIKWLVAAYARLEVL
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatctgatctgcttgacagcctgaacgataaacagcgcgaggcggtagccgcg
ccgcgcagcaacctgctggtgctggccggtgcaggcagcggtaagacccgcgttctggtg
caccgtatcgcctggctattggcggtagaaaactgttcgccgttctccatcatggcggtc
acctttaccaataaggcggcggcggaaatgcggcaccgtattgaggcgctgatcggtacc
agccaaggggggatgtggatcggcaccttccacggcctggcgcaccgcctgctgcgcgcc
caccatctggatgccggcctgccgcaggactttcaaatcctcgatagcgaagatcagctg
cgcctgctgaagcgcctgatcaaggccatgaatctggatgagaagcagtggccagcgcgc
cagggcatgtggtacatcaacggcaagaaagatgatgggctgcgtccgcagcacattgaa
agctatggtaatccagtggaacaaacctggctgcgcatctatcaggcctatcaggaagcc
tgcgatcgcgcggggctggtggactttgccgaactgctgctgcgcgcgcatgagctgtgg
ctgcataagccccagattctggagcactatcgcgcccgctttaacaatatcctggtggat
gagttccaggataccaaccgtattcagtatgcctggattcgcatgctggccggtgacagc
ggcagggtgatgatcgtcggcgatgacgatcagtcgatctatggctggcgcggcgcccag
gtagagaacattcagaaatttctcgacgatttccccggtgcacagacgattcgcctggag
cagaactaccgctccagcggcaatatcctgcgcgcggccaacgcgctgatcgaaaataac
gatgggcgtctgggtaaaaagctgtggacggaggacggtgaaggggagccgatttccctg
tattgcgcgttcaatgagttggatgaggcgcgcttcgtagttaaccgaatcaaggcctgg
caggataacggcggcgccctgaaagagtgcgccatcctgtaccgcagtaacgcccagtcc
cgcgtgctggaggaggcgctgctgcaggcggcgacgccctatcggatttatgggggaatg
cgtttcttcgagcgtcaggagatcaaagatgcgctggcctacctgcgcctgctgtccaac
cgtaacgatgacgccgcctttgagcgggtggtgaatacgccggtgcgcggcatcggcgat
cggacgctggacgtggtgcgtcagacggcccgcgatcgtcagcttaccctgtggcaggcg
acccgcgcgttgcttcaggagcaggtgtttccggggcgcgccgccaatgcgctgcgccgt
tttctggagctgattgaggcgctggcgcaggacagcgacgaccttccgctgcacgtgcag
accgatcgggtgatccgtgactccgggctgcgtcagatgtatgagcaggagaaaggcgag
aaaggacagacgcgcatcgaaaacctggaggagctggtgacggcaacgcgccagttcagc
tatgaggacgatgacgatctgtcgccgctgcaggcgtttctgtctcatgccgccctggag
tccggcgaggggcaggccgatgcctatcaggacgcggtacagctgatgaccctgcactcc
gccaaggggctggagtttcccctggttttcatcgttgggatggaggaggggatgttcccc
agccagatgtcgctggatgagggggggcggctggaggaggagcggcgcctggcctacgtc
ggcgtgacccgggcgatgcgtaagctgaccctgacctatgcggagagtcgacgcctgtac
ggcaaagaggtgtatcatcgtccgtcacgctttgtcggcgagctgccggagacgtgcgta
gaagaggtgcgcctgcgtgccagcgtgacgcgccccgtcagccatgcgcgcatggggacg
ccgttaagccagagtgacagcggctatcgtctggggcagcgcgtcacccatgccaaattc
ggcgaggggacgattattaacttggagggcagcggggagcatacccgtttacagatcgcc
tttaagggcgaggggattaagtggctggtcgccgcgtatgcccgcctcgaggtgctgtag
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