Edwardsiella sp. EA181011: QY76_02355
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Entry
QY76_02355 CDS
T03991
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
edw
Edwardsiella sp. EA181011
Pathway
edw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
edw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QY76_02355 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
edw03021
]
QY76_02355 (rho)
03019 Messenger RNA biogenesis [BR:
edw03019
]
QY76_02355 (rho)
Transcription machinery [BR:
edw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
QY76_02355 (rho)
Messenger RNA biogenesis [BR:
edw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QY76_02355 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AKM46326
LinkDB
All DBs
Position
complement(516651..517910)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGESMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARSKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTPEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDEFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagttgattacgcttggcgagagc
atggggctggaaaatctggcgcgcatgcgtaagcaggatattatttttgccatccttaag
cagcatgcgaaaagcggcgaagatatttttggcgatggcgtgctagagatcctgcaggac
ggttttggattcctgcgctccgcagacagctcctaccttgccggtcccgatgatatctac
gtttctcccagccaaatccgccgttttaacctgcgtaccggtgataccatttccggcaaa
attcgtccgccgaaagagggtgagcgctactttgccctgctgaaggttaacgaagttaac
tatgacaagccggaaaatgcccgcagcaagatcctgtttgaaaacctgacgccgctgcat
gccaattcgcgtctgcgcatggagcgtggcaacggttctacggaagacttgaccgcgcgc
gtgctggatctggcctcgccgattggccgcggtcaacgcggtctgatcgtcgctccgccg
aaggccggtaagacgatgctgctgcagaacatcgcccagagcatcgcctataaccatcct
gactgcgtgctgatggtgctgctgatcgatgagcgtccggaagaggtgacggagatgcag
cgtctggtgaagggtgaggtggttgcctcgacctttgatgagccggcgtcgcgccatgtt
caggtcgctgaaatggtgatcgaaaaggccaagcgtctggttgaacacaagaaagacgtg
atcatcctgctggactccatcacccgtctggctcgcgcctataacaccgtggtgccggcc
tccggtaaagtgttgaccggcggcgtggacgccaacgccctgcaccgtccgaagcgcttc
ttcggcgcggcgcgtaacgtggaggagggcggcagcctgaccatcatcgcgacggcgctg
atcgataccggctctaagatggatgaggttatctacgaagagtttaagggcaccggtaac
atggagctgcatctgtcgcgtaagattgctgagaagcgcgtcttccccgccatcgattac
aaccgctccggtacccgtaaagaagagctgctcaccacgccggaggagctgcagaagatg
tggatcctgcgcaagattattcacccgatgggtgagatcgatgcgatggagttcctgatc
aataagttggcaatgaccaaaactaacgatgagttctttgacatgatgaaacgctcttaa
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