Edwardsiella sp. EA181011: QY76_02365
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Entry
QY76_02365 CDS
T03991
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
edw
Edwardsiella sp. EA181011
Pathway
edw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
edw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QY76_02365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
edw03019
]
QY76_02365
Enzymes [BR:
edw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QY76_02365
Messenger RNA biogenesis [BR:
edw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QY76_02365
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
CCDC138_C
Motif
Other DBs
NCBI-ProteinID:
AKM46328
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All DBs
Position
518817..520106
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AA seq
429 aa
AA seq
DB search
MSKTHLTEQKFADFALHPMVIKALESKGFHSCTPIQALALPLAIAGRDVAGQAQTGTGKT
LAFLASTFHYLLTHPAIAERKTNQPRALIMAPTRELAVQIHSDAEPLAQETGLRLGLAYG
GDGYDKQLRVLEQGVDILIGTTGRLIDYTKQGHVDLGAIQVVVLDEADRMFDLGFIKDIR
WLFRRMPPTAQRLNMLFSATLSYRVRELAFEHMNNAEYVEVEPEQKTGHRIQEELFYPSN
EEKMRLLQTLLEEEWPDRCIIFANTKHRCEDIWGHLAADGHRVGLLTGDVPQKKRLRILE
DFTKGHIDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGNSISLA
CEEYVLNLPAIESYIGHSIPVSKYNGDALLKDLPAPKRLSRSRNGAGARRPGSPRRGSGA
PRPNRKRSG
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacacttgactgaacagaagtttgccgacttcgccctgcacccaatggtg
ataaaagcccttgaatcaaaagggtttcacagctgcactcccattcaggcactggcattg
cccctggcgatcgccgggcgtgacgttgcgggacaggcgcaaaccggcaccggcaagacg
ctagcatttttagcgtctacttttcattatctactgactcatccggccattgccgagcgc
aaaaccaatcagccgcgcgcgctgattatggcgccgacacgtgagctggccgtccagatc
cactccgatgccgagcctctggcccaagaaaccggcctgcgcctgggcctggcctacggc
ggcgatggctatgacaagcagctccgggtcttagagcagggtgttgatattctgatcggc
accaccggacgcctgatcgactataccaagcagggtcacgttgacctcggcgccattcag
gtcgtggtactcgacgaagccgatcgcatgttcgatctgggctttatcaaagacattcgc
tggctgttccgccgtatgccgccgaccgcccagcgtctcaacatgctgttttccgccacc
ctctcttatcgcgtgcgtgaactggcgttcgagcatatgaacaacgccgagtatgtcgag
gttgagccggagcaaaaaaccggacaccggatccaggaagagctgttctacccctccaac
gaagagaaaatgcgcctgctgcagacgctgctggaagaggagtggccggatcgctgcatc
attttcgccaacaccaagcaccgctgcgaggacatctgggggcacctggccgccgatggc
caccgcgtcggtctgctgaccggggacgtaccgcagaaaaaacgcctgcgcatcctggaa
gatttcaccaaggggcacatcgatattctggtcgccaccgacgtcgccgcgcgcggcctg
catatcccggcggtcacccatgtgtttaactatgacctgcccgacgactgtgaagactac
gtacaccgcatcggccgtaccggtcgtgccggcgccagcggcaactccatcagcctcgcc
tgtgaagagtatgtgctgaacctgccggctatcgaaagctatatcggccattcgattccg
gtcagcaaatacaacggcgatgccctgctcaaggatctgccggcccccaaacgcctgagc
cgtagccgtaacggcgccggcgcacgccgtccgggatcgccgcgccgcggcagcggcgca
ccgcgccctaaccgtaaacgctcaggttaa
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