Edwardsiella sp. EA181011: QY76_16765
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Entry
QY76_16765 CDS
T03991
Symbol
recB
Name
(GenBank) exonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
edw
Edwardsiella sp. EA181011
Pathway
edw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
edw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QY76_16765 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
edw03400
]
QY76_16765 (recB)
Enzymes [BR:
edw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QY76_16765 (recB)
DNA repair and recombination proteins [BR:
edw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QY76_16765 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_11
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AKM49034
LinkDB
All DBs
Position
complement(3782218..3785775)
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AA seq
1185 aa
AA seq
DB search
MPTQTLDPLTLPLRGARLIEASAGTGKTFTLAALYLRLLLGLGEENAYPRPLAVEEILVV
TFTEAATEELRGRIRSNIHALRLACLRGESGHPLFASLLAQIADRALAASLLLAAERQMD
EAAIYTIHGFCQRMLSHNAFESGVLFQQTLLQDELPLRRQACADFWRRHCYPLSADLAAA
VSQLWSGPEALLAELQPYLSGEMPLLRPAPDAQETLAQRHQTLLARIERVKDAWREHAHQ
VAGLIAASGVDKRSYSSRYLPKWMDEVSAWAQAETRDYQLPSSIARFAQATLLEKTSKGA
PPCHSVFSEIESLLAEPLSLRDLMLARALGEIRDGVQLEKRRRAELGFDDLLTRLDQALG
GAGGAALAAAIRQRYPVAMIDEFQDTDPLQYRIFQRIYTADDARSTEIALLLIGDPKQAI
YAFRGADIFTYLRARAAVDACYTLETNWRSAPGVVQAVNALFLRLEAPFLFAEIPFVPVD
SAAANAGRRLTIDGEPQSAMALWLYDVPGCTAQEYLQTMARRCAAQIRDWLSAGQRGSAR
LTGGDDGEAGRALCAADMTILVRSRHEATVMRDALSALNIPSVYLSNRDSVFSTPEARDL
LWLLQAILTPAQSRTLRSALAVGLLGLDAAALGALSQDERRWDAVVDEFDGYRRQWQRRG
VLPMLRELIGRRRLAENLLATAGGERRLTDVLHLGELLQEAAAQLDSEPALVRWLAQQID
SPQPQAESQQMRLESDRHLVQVITIHKSKGLEFPLVFLPFVATFRRQRQGLYHDRATHQA
VLDLCADDDALALADQERLAEDLRLLYVAVTRAVYHCALGIAPLVSGNRRKQDESDLHHG
AIGYLLQRAEPCDAEGLKQALQTLSNDQIRLEILSPGEGTPWQAEPIPPRALCARRFTRR
LQDDWRVTSYSALQQHGASTYLELLPRLDIDAAGENRTAAATIFSAHTFPRGAAPGTFLH
GLLEKLDFAAAPDPAWLAEQCLAQGIDLAWVPTLAQWLTQILQTPLDESGLTLSDLAPSQ
RQPELQFYLPIARPLRAEALDALIRRHDALSAQCEALAFSQVEGMLKGFIDLVFCHRGRY
YLLDYKSNWLGEDRAAYTPPAMAAAMIAHRYDLQYQLYTLALHRYLRHRLVDYDYQRHFG
GVFYCFLRGMAGAEPGQGVFACRPEEALVTALDALFAGEQEDSDA
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgcagactctggatccgctgaccctgccgctgcgcggcgcccgtctgatcgag
gcctccgccggcaccgggaagacgtttaccctggccgcgctctacttgcgtctgctgctg
ggcctgggcgaggaaaacgcctatccgcgcccgctggcggtagaggagatcctggtggtg
acctttaccgaggctgccaccgaggagctgcgcggccgcatccgcagcaatattcacgcg
ctgcggctggcctgcctgcgcggcgagagcggccatccgctgtttgccagcttgctggcg
cagatagccgatcgagcgctggcggcctctctgctgctggcggcggagcggcagatggat
gaggccgccatctacaccattcatggcttctgtcagcgcatgctcagccacaacgccttc
gagtccggggtgctgtttcagcagaccctgctgcaggacgagctgccgctgcgccgtcag
gcctgcgctgacttctggcgtcgccactgctatcccctttccgccgatctggcggcggcg
gtcagccagctatggagcggtccagaggcgctgttggccgagctgcagccctatctgtcc
ggcgagatgccgctgctgcgtccggcgcccgacgcgcaggagacgctggcgcagcgtcat
cagaccctgctggcccgcattgagcgggtcaaggacgcgtggcgggagcatgcgcaccag
gtggccggcctgatcgccgcctcgggcgtcgacaagcgcagctacagcagccgctatctg
cccaagtggatggatgaggtgtcggcctgggcgcaggcagagacccgtgactatcagctg
ccgtcgtcgatcgcgcgctttgcacaggcgacgctgctggagaaaaccagcaagggggcg
ccgccgtgccatagcgtattctcggagattgagtcgctgctggccgagccgctgtcgctg
cgcgatctcatgctggcgcgtgcgctcggtgaaatccgtgacggcgtacagctggagaag
cggcgccgggctgagctgggctttgacgacctgctaacccggttggatcaggcgctgggc
ggtgcgggcggcgcggcgctggccgcggcgattcgccagcgttatccggtggcgatgatc
gatgagttccaggataccgaccccctgcagtaccgtatcttccagcggatttataccgca
gacgacgccaggtcgaccgagatagcgctgctgctgatcggcgatcccaaacaggcgatt
tacgcctttcgcggcgcggatatcttcacctatctgcgcgcgcgcgcggcggtggacgcc
tgctataccctggagaccaactggcgctcggcgcctggcgtagtacaggccgtcaacgcg
ctgttcttacgcctggaggcgccgtttttgttcgcagagatcccctttgtaccggtggac
tccgccgcggccaacgcgggacgccggctgacgatcgacggtgagccccagtcggcgatg
gcgctgtggctgtatgatgttcccggctgcacagcgcaggagtatctgcagacgatggcg
cgccgctgcgcggcgcagatccgtgactggctcagcgccggtcagcggggcagcgcgcga
ctgaccggcggtgatgacggcgaggcgggacgcgcgctgtgcgccgccgatatgaccatc
ctggtacgcagccgccacgaggcgacggtgatgcgcgatgcgctgagcgcgctcaatatc
ccctcggtctatctttccaaccgcgacagcgtcttctcgacaccggaggcgcgcgacctg
ctgtggctgctgcaggcgatcctgacgccggcccagagccgaaccctgcgcagcgcgctg
gccgtaggcctgctggggctggatgcggcggcgctgggcgcgctgagtcaggatgagcgg
cgctgggatgcggtggtggatgagtttgacggctatcgccgtcagtggcagcgccgcggg
gtgctgccgatgctgcgagagctgatagggcgccgccgcctggcggagaacctgctggcg
accgcggggggcgagcgccgcctgaccgacgttctgcacctgggcgagctgctgcaggag
gccgcggcgcagctggacagcgagccggcgctggtgcgctggctggcccagcagatcgac
agcccgcagccgcaggcggaaagccagcaaatgcgtctggagagcgatcgccatctggtg
caggtgatcaccattcacaaatccaaagggctggagtttccgctggttttcctgcccttt
gtggcgacgttccgccgtcagcggcaggggctgtaccatgacagggccacccaccaggcg
gtgttggatctgtgtgcggacgatgatgcgctggcgctggcggatcaggagcgactggcg
gaggatctgcgcctgctgtacgtcgccgtgacgcgtgccgtgtatcactgtgcgctgggt
atcgccccgctggtgtctggaaatcgccgtaaacaggatgagagcgatctgcatcacggc
gctatcggttatctgctgcagcgcgccgagccctgcgatgccgaagggctgaagcaggcg
ttgcaaacgctgtcgaatgaccagattcgcctggagatcctctctcccggcgagggaact
ccgtggcaggctgagccgataccgccgcgcgcgctctgcgcccgccgctttacccgtcgt
ctgcaggatgattggcgggtgaccagctactccgcgctgcagcagcacggcgctagcacc
tatctggagctgttgccgcgcctggatatcgatgccgccggcgagaatcgcacggcggcg
gcgacgatcttcagcgcccacacctttccacgcggcgcggcgccgggaacctttttacac
ggcctgttggagaagttggacttcgccgcggcgccggatccggcgtggctggccgagcag
tgcctggcgcaggggatcgatttggcatgggtgccaacgctggcgcagtggctgacgcag
atcctgcagacgccgctggatgagagcgggctgaccctgagcgatctggccccgtcgcag
cgccagcccgagctgcagttttatctgccgattgcccgcccgctgcgggcggaggcgctg
gatgcgctgatccgccgccacgatgcgctgtcggcgcagtgtgaggcgctggcgttcagc
caggtcgagggcatgctgaagggctttatcgacctggttttctgccaccgggggcgctat
tacctgctggactataagtccaactggctgggtgaggatcgagcagcctatactcccccg
gcgatggcggcggcgatgatcgcgcaccgctatgatctgcagtatcagctgtataccttg
gcgctgcaccgctatctgcgtcatcggctggtggattatgactatcagcgccacttcggc
ggcgtcttttactgtttcctacgcggcatggcgggcgctgagccggggcagggggtcttt
gcctgccgccccgaggaggcgctggtcacggcgctggatgcgttgtttgccggggaacag
gaggatagcgatgcgtga
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