Edwardsiella sp. EA181011: QY76_16840
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Entry
QY76_16840 CDS
T03991
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
edw
Edwardsiella sp. EA181011
Brite
KEGG Orthology (KO) [BR:
edw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
edw03016
]
QY76_16840
Enzymes [BR:
edw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
QY76_16840
Transfer RNA biogenesis [BR:
edw03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
QY76_16840
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AKM48744
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All DBs
Position
3805954..3806484
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AA seq
176 aa
AA seq
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MQQRLFFAIPLPPPLQQTLIQWRAEHFSSQAGRPIAAANLHLTLAFLGDVGSAQQQRLQT
LAGRIHQAPFSLTLDDAGQWPRPGVVWLGMRRAPRGLIQLADLLRSQAARSGCYQSPHPF
HPHVTLLRHAYQAIAIPAATFRWTFDVTHFSLFSSQQAQGRTRYQPLASWPLRRDD
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaacgccttttttttgccattccgctaccgccgccgctgcagcaaacgctgatc
cagtggcgagccgagcacttctcttcccaggcgggacgaccgatcgccgccgccaacctg
catctgacgctggcttttcttggcgacgtcggcagcgcacagcagcagcgtctgcagacg
ctagccgggcgtatccatcaggcgccctttagcctgacgctagatgacgccggccagtgg
ccacgccccggcgtggtctggctgggtatgcgacgggcgccgcgcgggctgatccagctg
gcagatctgctccgctcacaggcggcgcgcagcggctgctaccagagcccgcaccccttt
catccccatgttacgctgctgcgccacgcctatcaggcgatcgcgatccccgcggcgacc
tttcgttggacgttcgacgtcacccatttttccctgttcagctcgcagcaggctcaggga
cgcacccgctatcaaccgctggccagctggcccctgcggcgcgatgactaa
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