Enterobacter dykesii: F0320_06270
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Entry
F0320_06270 CDS
T10162
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
edy Enterobacter dykesii
Pathway
edy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
edy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F0320_06270 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
edy03019
]
F0320_06270 (rhlE)
Enzymes [BR:
edy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
F0320_06270 (rhlE)
Messenger RNA biogenesis [BR:
edy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
F0320_06270 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
XBN40996
UniProt:
A0AAU7J4W3
LinkDB
All DBs
Position
1325591..1326970
Genome browser
AA seq
459 aa
AA seq
DB search
MSFDSLGLNPEILRAIAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
ELLVKNQPHAKGRRPVRALILTPTRELAAQIGENVRDYSRYLNIRSLVVFGGVSINPQMM
KLRGGVDVLIATPGRLLDLEHQNAVKLDSIEILVLDEADRMLDMGFIHDIRRVLAKLPAR
RQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKKEIPRIETPGYEVDPSIKAEPIQNGRQGGRGQGGGGRGQQPRRSEGGAPKSSGKP
PRRNNDSKPAGENPWRSGEGKPAGEGQRRRRPRKPANPQ
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcccttggcctgaacccggaaattctgcgcgcgatcgcagagcagggc
tacgttgagccaaccccaatccagcagcaggcgatccccgccgttcttcagggccgtgac
ctgatggcgagcgcccagaccggtaccggcaaaaccgcgggctttaccttgccgctgctg
gaactgctggtaaaaaaccagccgcatgccaaaggccgtcgtcctgtccgtgcgctgatc
ctcaccccaacccgcgagctggcggcgcagattggcgagaacgtgcgtgactatagccgc
tatctcaacattcgctctctggtggttttcggcggggtaagcatcaacccgcagatgatg
aagctgcgcggcggcgtggacgtgctgatagcaacgccgggccgtctgctggatctggaa
caccagaacgcggtgaagcttgatagcatcgaaattctggtgctggacgaagccgaccgc
atgctcgacatgggctttattcacgacattcgtcgcgtgctggccaagctgcctgcgcgt
cgtcaaaacctgctcttctccgcgaccttctccgacgaaatcaaggcgctggcggaaaag
ctgctgcataacccgctggaagtggaagtggctcgccgcaacaccgcctccgaacaggtg
acgcagcacgttcactttgtggataaaaagcgcaagcgggaactgctctcccagatgatc
ggccagggtaactggcagcaggtgctggtctttacccgcaccaagcacggcgcgaaccac
ctggcggaacagctgaataaagacggcatccgcagcgccgccattcacggtaacaagagc
cagggcgcgcgtacccgtgcgctggcggacttcaaatccggcgacatccgcgtgctggtg
gcgaccgacatcgccgcccgtggcctcgacattgaagagctgccgcacgtggtgaactac
gagctgccaaacgtgccggaagattacgtgcaccgtatcggtcgtaccggccgcgcggcg
gcaaccggtgaagcgctttctctggtctgcgtggacgagcacaagctgctgcgcgacatc
gagcgcctgctgaagaaagagatcccgcgcatcgaaaccccgggctacgaagtggacccg
tctatcaaagccgagccgattcagaacggtcgtcagggcggtcgcggtcagggcggcggc
ggtcgcggtcagcagccgcgtcgtagcgaaggtggcgcgccgaaatcatccggcaaaccg
ccgcgtcgtaacaacgacagcaaaccagcgggtgaaaacccgtggcgcagcggcgaaggg
aaaccggcaggagaagggcagcgtcgacgccgcccgcgcaagcctgctaacccgcagtaa
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