Enterobacter dykesii: F0320_17450
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Entry
F0320_17450 CDS
T10162
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
edy Enterobacter dykesii
Pathway
edy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
edy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
F0320_17450 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
edy03400
]
F0320_17450 (recB)
Enzymes [BR:
edy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
F0320_17450 (recB)
DNA repair and recombination proteins [BR:
edy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F0320_17450 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_25
bDLD3
Motif
Other DBs
NCBI-ProteinID:
XBN39077
UniProt:
A0AAU7IZ50
LinkDB
All DBs
Position
complement(3671692..3675234)
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AA seq
1180 aa
AA seq
DB search
MTDTAESLDPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGLGGNAAFPRPLSVEELL
VVTFTEAATAELRGRIRSNIHELRIACLRQSTDNPLYASLLEEIADKQQAAQWLLLAERQ
MDEASVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESVLRYQACADFWRRHCYPLQRDIA
EAVHALWKGPEALLRAIDRYLQGEAPVIKSPPPADETLASRHEKIIARIADIKQKWIESV
GEIDAIIENSGIDRRKFNRGNQGKWIDKISAWAQEETRGYQLPDALEKFSRRFLVERTKA
DGIVPEHPLFVAIETLLAEPLTLNDLMITRAMTEIRDAVAREKRRRGELGFDDMLSRLDA
ALCSENGEALAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWRQQPGTALLLIGDPKQAIY
AFRGADIFTYMKARSEVDAHYTLDINWRSSPGMVESVNALFSRMDTAFMFREIPFQPVKF
AEKNASLRFEFNGETQPAMNFWLLDGEGCGVADYQNAMAQHCAAQIRDWLSAGAHGKALL
WKGDKPAPVKASDITVLVRSRQEAALIRDALTLLNIPSVYLSNRDSVFETLEAQEMLWLL
QAVLAPERESTLRSALASAMLGLNARDIDALNNDEAAWDAVVEEFVRYREKWQKRGVMAM
VRELMAQRRIAENMLATAGGERRLTDILHISELLQEAGTQLESEHALVRWLAQQIADPNS
NSSSQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFIANYRVQDQAFYHDRESFEAVLDL
SNAESSVELAEAERLAEDLRLLYVALTRSVWHCSLGVAPLFRRRGEKTGESDFHLSALGR
LIQHGEPKDAAGLRQCIASLCTEHIALHIPSQPDNSRWQMPELRESELHARKVVRTIADD
WRVTSYSGLQQHGQSIAQDLMPKLDVDAAGAGSVPAEPVLTPHQFPRGASPGTFLHSLFE
ELDFTQPVSEEWVLKMLQSGGYDAQWQPVLTDWIRAVLNAPLTTQGISLNQLTAKDKQVE
MEFYLPIASPLRAEALDALIREYDPLSAGCPPLNFRQVQGMLKGFIDLVFRHEGRYYLLD
YKSNWLGESSEAYTQDAMASAMQMHRYDLQYQLYTLALHRYLRHRMADYRYETHFGGVIY
LFLRGVDANDPRSGVFSTRPSAELIEKMDNLFAASTEEVA
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataccgctgagtcccttgatcccttacgtttacctctgcagggtgaacgattg
attgaagcctcagcgggaacgggaaaaaccttcaccattgccgccctttacctgcgtctg
ctgctggggcttggcggcaacgccgcttttccacgccctttgagcgtggaagagctgctg
gtggtcaccttcaccgaggctgccaccgctgagctgcggggccgtattcgcagcaatatc
cacgagctgcgcatcgcctgtctgcgtcagagcacggataaccctctctacgcgagcctt
ctggaagagattgccgataagcaacaggcagcccagtggctgctcctcgctgaacggcag
atggatgaagcgtccgtcttcaccattcacggtttttgccagcgtatgctgagcctgaat
gcgttcgagtccggaatgctgtttgaacagcagctcattgaagatgaatccgtgcttcgc
tatcaggcctgcgcggatttctggcgtcgccactgctacccgttacagcgcgatatcgcc
gaagcggtacatgcgctgtggaagggcccggaggcgctgctgcgcgctatcgatcgttat
ctgcagggtgaagcaccggtcatcaaatccccgccgccagcggatgaaaccctggcctca
cgccatgaaaaaatcatcgcgagaattgccgatatcaagcaaaaatggattgagtccgtt
ggcgagattgacgccatcatcgaaaactccgggattgaccgtcgcaagtttaaccgtggc
aatcaggggaaatggatcgacaagatcagcgcctgggcgcaggaagaaacgcgaggctac
cagctcccggacgcgctggagaaattctcccggcgtttccttgttgagcggaccaaagcc
gacggcattgtgcctgagcatcctctgtttgtggcgattgaaaccctgctggctgagccc
ttaacgctcaacgatctgatgattacccgcgccatgacggaaattcgcgacgccgtcgcg
cgtgagaaacgccgccggggtgaactggggtttgacgatatgctgagccgcctcgatgcg
gcgctgtgcagtgaaaatggcgaagcgcttgccgccgcgattcgcacccgcttcccggtg
gcgatgatcgacgaatttcaggataccgaccctcagcagtaccgcattttccgccgtatc
tggcgccagcagcccggtaccgcgctgttgttaatcggcgatccgaaacaggccatctac
gccttccgcggtgcggatattttcacttacatgaaagcccgcagcgaggttgacgcgcac
tacacgctcgatatcaactggcgctcctctcccggcatggtggaaagcgtcaacgcgctc
ttcagccgcatggatacggcgtttatgttccgtgagatcccgtttcagccggtaaagttc
gccgagaaaaatgcctcgttgcgcttcgagttcaacggcgagacgcagcctgccatgaac
ttctggctgctggacggggaaggctgcggcgttgccgactatcaaaatgccatggcccag
cactgtgccgcacaaatccgcgactggctcagcgcgggcgcgcacggtaaagcgctgctg
tggaagggggataaacctgccccggtaaaggcatctgatatcacggtgctggtgcgcagc
cgtcaggaggccgcgctcatccgcgacgccctgacgttactaaatattccctccgtctac
ctctcaaaccgcgacagcgtctttgaaacgctggaagcgcaggagatgctatggctgctg
caggccgtgctggctccggagcgggaaagcacgctgcgtagcgcactggcgagcgcgatg
ctcgggctgaacgcgcgggatatcgatgcgctcaacaatgacgaagccgcgtgggatgcc
gtggtagaagagtttgttcgctaccgcgaaaaatggcagaagcgtggagtcatggcgatg
gtgcgcgagctcatggcgcagcgccgcattgcggagaatatgctggcgacagcaggcggc
gagcgccgtttgaccgatattttacatatcagcgaactgctgcaggaagccggtacgcag
ctggagagcgaacacgccctggtgcgctggctggcgcagcagattgccgacccaaacagt
aattcgtccagccagcagatgcgccttgagagtgataaacatctggtgcagatcgtcacc
attcacaagtcgaaaggcctggaatatccgctggtctggctgccgtttatcgccaattat
cgcgtgcaggatcaggccttttaccacgatcgcgagtcttttgaggcggtgctcgatctc
agcaacgcggagtccagcgttgagctggccgaagccgagcgtctggcggaagacctgcgc
ctgctttacgtggcgctgacccgttcggtctggcactgcagcctgggcgttgcgccgctg
ttccgtcgccgtggcgaaaagaccggggagagcgattttcatctgagcgcgctggggcgg
cttattcagcacggcgaacccaaagacgcggcgggcctgcgccagtgcatcgcatcgctt
tgcacggagcatattgccctgcatattccgtcgcagcccgacaacagccgctggcagatg
ccggagctgcgtgagtcagagctccatgcccgcaaggttgtgcgtaccattgccgacgac
tggcgcgtcaccagctactccggtctacaacagcacgggcagagtattgcgcaggatctg
atgccaaaactggacgtggacgccgcaggagccggtagcgtacccgctgagccggtgctt
acgccgcaccagttcccgcgtggcgcctcgccgggcacgtttttgcacagcctgtttgaa
gagctggattttacccagccggtatccgaagagtgggtgctgaagatgttacagagcggt
ggttacgacgcacagtggcagccggttcttaccgactggatccgcgcggtactgaacgcg
ccgctcacgacgcaggggatctccctgaaccagttgaccgccaaagataagcaggtggag
atggagttttatctccccatcgccagcccgctcagggccgaggcgcttgatgcgctgatc
cgcgagtacgatccgttatctgccgggtgcccgccgctgaatttccgccaggtacagggg
atgctcaaaggctttatcgacctggttttccgccacgaagggcgctattacctgctggat
tacaaatcaaactggctgggtgaaagcagcgaggcctacacccaggacgcgatggcctct
gccatgcaaatgcatcgctacgatctgcagtaccagctttacaccctggcgctgcaccgt
tacctgcgccatcgcatggccgattaccgctacgaaacgcattttggcggcgtcatttac
ctgttcctgcgcggagtggatgcaaacgacccgcgttccggcgtctttagcacgcgtccg
tctgcggaactgattgaaaaaatggataacctgtttgctgcaagcacggaggaggtggca
tga
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