Enterobacter dykesii: F0320_18430
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Entry
F0320_18430 CDS
T10162
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
edy Enterobacter dykesii
Pathway
edy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
edy00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
F0320_18430 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
edy03021
]
F0320_18430 (rpoD)
Transcription machinery [BR:
edy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
F0320_18430 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
XBN39255
UniProt:
A0AAU7IZY1
LinkDB
All DBs
Position
3876522..3878369
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AA seq
615 aa
AA seq
DB search
MEQNPQSQLKLLVQRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP
DADDLLLAETSNNTDEDAEEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEID
IAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSDLITGFVDPNAEEDMAPTA
THVGSELSQEEMDDDEDEDEEESDDDTADDDNSIDPELAREKFAELRTQYEVTRDTIKAK
GRSHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMRVMMDRVRTQERIIMKLCVEQCKMP
KKNFITLFTGNETSETWFNAAIAMNKPWSEKLHDVKDDVHRGLQKLHQIEEETGLTIEQV
KDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDK
FEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREP
TPEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTE
SLRAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKL
RHPSRSEVLRSFLDD
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaacccgcagtcacagctgaaacttcttgtccaacgtggtaaggagcaaggc
tatctgacctatgccgaggtcaatgaccatctgccggaagatatcgtcgattcagatcaa
atcgaagatatcatccaaatgatcaatgacatgggcattcaggtgatggaagaagcaccg
gatgccgatgatctgttgctggctgaaacctccaacaacactgacgaagatgcggaagaa
gctgctgcacaggtactgtccagcgtggaatctgaaatcgggcgtaccactgacccggtc
cgcatgtacatgcgcgaaatgggtaccgttgaactgttgacccgcgaaggcgaaattgac
atcgcaaaacgcatcgaagacgggatcaaccaggttcagtgctccgttgccgagtacccg
gaagcgatcacctatctgctggagcagtacgatcgcgttgaagcggaagaagcgcgcctg
tctgacctgatcaccggttttgtcgacccgaacgctgaagaagatatggcgcctaccgcc
actcacgtcggttctgaactgtctcaggaagagatggatgatgacgaagacgaagatgag
gaagagagcgacgacgacaccgcggacgatgacaacagcatcgacccggagctggcgcgt
gagaagtttgccgagctgcgtacccagtacgaagtgacgcgtgacaccatcaaagcgaaa
ggccgcagccatgccgccgctcaggaagagatcctgaagctgtctgaagtattcaaacag
ttccgcctggtgccaaaacagttcgactacctggtgaacagcatgcgcgtaatgatggat
cgcgtacgtacccaggagcgcatcatcatgaagctgtgcgttgagcagtgcaaaatgccg
aagaagaacttcatcaccctcttcaccggcaacgaaaccagcgaaacctggttcaacgcg
gctatcgcgatgaacaagccgtggtctgaaaaactgcacgacgtgaaggacgatgtgcat
cgcggcctgcagaaactgcatcagattgaagaagagaccggcctgaccatcgagcaggtt
aaagacatcaaccgtcgtatgtccatcggtgaagcgaaagcccgccgtgcgaagaaagag
atggttgaagctaacttgcgtctggttatctctatcgccaagaaatacaccaaccgtggc
ctgcagttcctggatctgattcaggaaggcaacattggtctgatgaaagcggtagataag
tttgaataccgtcgtggttacaagttctccacctacgcaacctggtggatccgtcaggct
atcacccgctctatcgcggatcaggcgcgcaccatccgtattccggtgcatatgattgag
accatcaacaagctcaaccgtatctcccgccagatgctgcaggagatgggccgcgagccg
acgccggaagagctggccgagcgcatgctgatgccggaagacaagatccgtaaagtgctg
aagatcgccaaagagccaatctccatggaaacaccaatcggtgatgatgaagattcgcat
ctgggtgatttcatcgaggataccaccctcgagctgccgctggactctgcgaccaccgag
agcctgcgcgctgcgacgcacgacgttctggctggcctgaccgcccgtgaagcgaaagtc
ctgcgtatgcgtttcggtattgatatgaacaccgaccacacgctggaagaagtgggtaaa
cagttcgacgttacccgcgaacgtatccgtcagatcgaagcgaaggcgctgcgtaagctg
cgtcatccaagccgctctgaagtgctgcgtagcttcctggacgattaa
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