Enterobacter dykesii: F0320_18970
Help
Entry
F0320_18970 CDS
T10162
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
edy Enterobacter dykesii
Pathway
edy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
edy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F0320_18970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
edy03019
]
F0320_18970
03009 Ribosome biogenesis [BR:
edy03009
]
F0320_18970
Enzymes [BR:
edy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
F0320_18970
Messenger RNA biogenesis [BR:
edy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
F0320_18970
Ribosome biogenesis [BR:
edy03009
]
Prokaryotic type
rRNA helicases
F0320_18970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
DeaD_C
ResIII
CMS1
DRTGG
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
XBN39353
UniProt:
A0AAU7IZW9
LinkDB
All DBs
Position
complement(3978349..3980244)
Genome browser
AA seq
631 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAF
SLPLLNNIDPDLRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPDG
HQTALFSATMPEAIRRITKRFMKDPQEVRIQSSVTTRPDISQSYWSVYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEADLPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLSQIQPVAEGEELD
METLAAALLKMAQGERSLIVPPDAPMRPKREFRDRDDRFERRGDRNDRGPRGDRPERGGE
DRPRRERRDAGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIEL
PKGMPGEVLQHFTRTRILNKPMNMQLMGDAQPRPDRGGERRGGGRSFGGERREGGRSEGR
GGEGRRFSGERRENRGPRREEGTSRRRFGDA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcc
cttaacgatctgggttacgaaaaaccatctccgatccaggctgagtgtatcccacacctg
ctttctggtcgtgacgtgctgggcatggcccagactggtagcggtaaaactgcagcattc
tcgctgccgctgctgaacaacattgatcctgacctgcgtgcaccgcagatcctcgtcctg
gctccaacccgtgaactggctgttcaggttgcagaagccatgacggaattctctaaacat
atgcgcggcgtaaacgtggtagccctgtacggcggccagcgttatgacgtgcagttacgt
gccctgcgccagggcccacagattgttgtcggtacgccgggccgtctgctggatcacctg
aagcgcggtactctggatctctctaaactgagcggcctggtactggatgaagcagatgaa
atgctgcgtatgggcttcatcgaagacgtcgaaaccatcatggcgcagatcccggacggt
catcagaccgcgctgttctctgccaccatgccagaagcgattcgtcgtatcaccaagcgc
ttcatgaaagatcctcaggaagtgcgtattcagtccagcgtaaccactcgcccggacatc
agccagagctactggtctgtgtacggcatgcgcaaaaacgaagcgctggtacgtttcctg
gaagcggaagattttgatgcggcgattatcttcgtgcgtaccaaaaacgcgaccctggaa
gtggctgaagccctggagcgtagcggctacaacagcgcagcgctgaacggcgacatgaac
caggctctgcgtgagcagactctggagcgtctgaaagacggtcgtctggatatcctgatt
gccaccgacgtggcagcacgtggtctggacgttgagcgtatcagcctggttgttaactac
gacatcccgatggattccgagtcttacgttcaccgtatcggccgtaccggtcgtgcgggt
cgtgctggccgtgcgctgctgttcgttgagaaccgcgagcgtcgtctgctgcgtaacatt
gaacgcaccatgaagctgaccattccagaagcggacctgccaaacgcagagctgttgggc
aaacgccgtctggaaaaattcgccgcgaaagtacagcagcagctggaaagcagcgatctg
gaccagtaccgcgcgctgctgtcgcagattcagcctgttgctgaaggcgaagagctggac
atggaaaccctggctgcagcactgctgaaaatggctcagggcgaacgtagcctgatcgtg
ccaccagatgcgccgatgcgtcctaagcgtgaattccgtgaccgtgacgatcgcttcgaa
cgtcgtggcgaccgtaatgaccgtggcccacgtggtgaccgcccagagcgtggtggtgaa
gaccgtccacgtcgcgagcgtcgcgacgcgggtgatatggaactgtaccgtattgaagtg
ggtcgtgatgatggcgttgaggttcgtcacatcgttggcgcgatcgctaacgaaggcgac
atcagcagccgttacattggtaacatcaagctgttcgcatcccactctaccatcgagctg
ccaaaaggcatgccgggcgaagtgctgcagcactttacgcgtactcgcatcctgaacaag
ccgatgaacatgcagctgatgggtgatgcacagccacgccctgaccgcggtggtgaacgt
cgtggcggtggtcgcagcttcggtggcgaacgtcgtgaaggcggccgcagcgaaggtcgc
ggtggtgaaggtcgtcgtttctccggcgagcgtcgcgaaaaccgtggtccacgtcgtgaa
gaaggcaccagccgccgtcgtttcggtgacgcgtaa
DBGET
integrated database retrieval system
