Enterobacter dykesii: F0320_20725
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Entry
F0320_20725 CDS
T10162
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
edy Enterobacter dykesii
Pathway
edy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
edy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F0320_20725 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
edy03019
]
F0320_20725 (recQ)
03400 DNA repair and recombination proteins [BR:
edy03400
]
F0320_20725 (recQ)
Enzymes [BR:
edy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F0320_20725 (recQ)
Messenger RNA biogenesis [BR:
edy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
F0320_20725 (recQ)
DNA repair and recombination proteins [BR:
edy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F0320_20725 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
XBN39666
UniProt:
A0AAU7J1H2
LinkDB
All DBs
Position
complement(4336254..4338083)
Genome browser
AA seq
609 aa
AA seq
DB search
MAQAEVLNQESLAKQVLHETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVP
ALVLNGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQTREQQQEVMAGCRTGQIRLLY
IAPERLMLDNFLDHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPELPFMAL
TATADDTTRLDIVRLLGLNDPYIQVSSFDRPNIRYMLMEKFKPLDQLLRYVQEQRGKSGI
IYCNSRAKVEDTAARLQNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGLMDARKAL
STIYRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYGIGKEQSHEHWVSIIRQLIHLG
FATQNIAHHSALQLTEAARPVLRGDVELKLAVPRVIALKPRVMQKSYGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPLSASEMLSVNGVGTRKLERFGKEFMALIR
SHADGDDEE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagtattgaatcaggagtcgctggctaaacaggttttgcatgaaacc
tttggctaccagcagttccgccctggccaggaaaccatcattgaaacggtgctggaaggt
cgtgattgcctggtggtaatgccgaccggtggcggcaagtccctctgttatcaggtgcct
gcgctggtgcttaacggcctgacggtcgtggtatcccccctcatttctctgatgaaagac
caggttgaccagctgcttgccaacggcgtggcggcggcctgtctcaactcgacccaaacc
cgggagcagcagcaagaggtgatggccggttgtcgtaccggacagatccgcctgctgtat
atcgccccggaacgcctgatgctggataacttcctcgatcacctggcgcactggaacccg
gtcctgctggcggtggacgaagcgcactgtatttcgcaatggggacacgatttccgcccg
gaatacgctgccctcggccagctgcgtcagcgcttccccgagctgccgtttatggcgctt
accgccacggcggatgacaccacgcggctggatatcgttcgtctgctcgggctgaacgac
ccctatattcaggtcagcagctttgaccgccccaacatccgctatatgctgatggaaaag
ttcaagccgctggatcagctcctgcgctacgtccaggagcagcgcggcaagtccggcatc
atctactgtaacagccgtgcgaaggtggaagacaccgccgcgcgcctgcaaaaccgtggc
tttagcgccgccgcctatcacgccggattagagaaccacatccgcgccgacgtgcaggaa
aaattccagcgcgatgacctgcaaatcgtcgtcgcgacagtggcgttcggaatggggatc
aacaagcccaacgtgcgctttgtggtgcacttcgacatcccgcgcaatatcgaatcctac
tatcaggaaaccggccgcgccgggcgtgacgggctgcctgcggaagcgatgctgttttac
gatccggccgatatggcgtggctgcgccgctgtctggaagagaagccgcagggacagctg
caggatatcgagcgccacaagctcaacgcgatgggcgcgtttgccgaagcgcaaacctgc
cgtcgtctggtgttgctcaactactttggtgaagggcgccaggagccgtgcggcaactgc
gatatctgcctcgatccgccaaagcagtacgatggcctgatggacgcgcgtaaggcgctc
tcgaccatttaccgtgtgaatcaacgcttcgggatgggctacgtggtggaggtgctgcgc
ggcgccaacaaccagcgtattcgcgatatgggtcacgacaagctgccggtctacggtatt
ggcaaggagcagagccacgagcactgggtgagcatcattcgccagctgatccacctcggc
ttcgccacgcagaacattgcccatcactccgccctgcagctgaccgaggcggcgcgtccg
gtcctccgcggtgacgttgagcttaagctcgccgtgccgcgcgtcatcgccctgaagcca
cgcgtgatgcagaaatcctacggcggcaactacgaccgcaagctgttcgccaaactgcgc
aagctgcgtaaagccatcgccgacgaagaaaatatcccgccttacgtggtgttcaacgac
gcgacgctgatcgagatggccgaacagatgccgctcagcgccagcgaaatgctcagcgtc
aacggcgtgggaacgcgcaagctggagcgcttcggtaaagagtttatggcgctcatccgc
tctcacgccgatggtgatgatgaggagtag
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