Enterobacter dykesii: F0320_20895
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Entry
F0320_20895 CDS
T10162
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
edy Enterobacter dykesii
Pathway
edy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
edy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F0320_20895 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
edy03021
]
F0320_20895 (rho)
03019 Messenger RNA biogenesis [BR:
edy03019
]
F0320_20895 (rho)
Transcription machinery [BR:
edy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
F0320_20895 (rho)
Messenger RNA biogenesis [BR:
edy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
F0320_20895 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
XBN39691
UniProt:
A0AAU7J151
LinkDB
All DBs
Position
complement(4370210..4371469)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENQARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
FDKPENSRNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgatcactctcggcgaaaat
atggggctggaaaaccaggctcgtatgcgcaagcaggacatcattttcgccatcctgaag
cagcacgctaagagtggcgaagatatctttggcgacggtgtgctggagatattgcaagac
ggatttggtttcctccgctctgcagacagctcctacctcgccggccctgacgacatctac
gtatcccccagccaaatccgccgtttcaacctccgcactggtgacaccatttcaggtaag
attcgtcctcctaaagagggtgaacgctactttgcgctgttgaaagtcaatgaagttaac
ttcgacaaaccggaaaactcgcgtaataagatcctctttgagaacttaacgccgctgcac
gcgaactctcgcctgcgcatggagcgtggtaacggttcaactgaagacttaaccgcgcgt
gttctggatctggcatcaccaattggtcgcggccagcgtggtctgattgtggcaccgcca
aaagcgggtaaaaccatgctgctgcagaacatcgcgcagagcattgcctataaccaccca
gactgcgtgctgatggtgctgctgattgacgaacgtccggaagaagtgaccgagatgcag
cgtctggttaaaggtgaagtggttgcttctaccttcgacgaaccggcatctcgccacgtt
caggttgcggaaatggttatcgagaaggcgaaacgcctggttgagcacaagaaagacgtg
atcatcctgcttgactccatcacccgtctggcgcgtgcctacaacaccgtggttccggcg
tctggtaaagtgctgaccggtggtgtggatgctaacgccctgcatcgtccgaaacgcttc
ttcggtgccgcacgtaacgtggaagagggcggcagcctgactatcatcgcgacggcgctg
atcgataccggttctaaaatggacgaagtgatttacgaagaatttaaaggtacaggtaac
atggaactgcacctttctcgtaaaatcgctgagaaacgcgtcttcccggctatcgactac
aaccgttccggtacccgtaaagaagagctgctcaccacgcaggaagagctgcagaaaatg
tggatcctgcgcaaaatcatccatccaatgggtgaaatcgacgcgatggagttcctcatt
aacaaactggcgatgaccaaaaccaacgacgatttcttcgacatgatgaaacgctcgtaa
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