Enterobacter ludwigii EcWSU1: EcWSU1_00672
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Entry
EcWSU1_00672 CDS
T01652
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein rapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
eec
Enterobacter ludwigii EcWSU1
Brite
KEGG Orthology (KO) [BR:
eec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eec03021
]
EcWSU1_00672 (rapA)
Transcription machinery [BR:
eec03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
EcWSU1_00672 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
Flavi_DEAD
AAA_34
Motif
Other DBs
NCBI-ProteinID:
AEW72112
UniProt:
G8LM28
LinkDB
All DBs
Position
complement(700928..703834)
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AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAVDARMVTLLFPATGENRLYARNDSPVTRVMFNPGDT
VTSHDGWQLKVEDVKEENGLLAYIGTRLDTDEANVILREVLLDSKLVFSKPQDRLFAGQI
DRMDRFSLRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH
DADNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEDAPSREYMAIE
QLAERVPGVLLLTATPEQLGLESHFARLRLLDPNRFHDFEQFVEEQNNYRPVADAVALLL
AGKHLSNDELNTLSDLIGEQDIEPLLQAANSDSDNADSARKELIDMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGD
TGTWWNFDPRVEWLMGYLTAHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI
VERDRAAAWFAEEDSGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWFHEGLDAFEHTCPTGRPIYDQVHADLIGYLAAPENT
DGFDELIKACRDKHEALKSQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLISFSM
NLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWE
HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPSTP
VRLLLDKNGTNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQLGEMQIEKAAR
ALIDAARQEADDKLSAELSRLEALKAVNPNIRDDELAAIESNRQQVLESLNQAGWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatacagaaagcgaacttggattagga
accgtggttgccgtggatgcacgaatggttaccctccttttccctgctaccggtgaaaac
cgcctgtacgcccgcaatgattcccctgtgacccgcgtgatgttcaacccgggtgacacc
gtgaccagccacgacggctggcagctaaaggtcgaagacgtaaaagaagagaatggactg
ctcgcctacatcgggactcgcctggacaccgacgaggccaatgtcatcctgcgtgaggtg
ctgctcgacagcaaactggtattcagtaagccgcaggatcgcctgtttgccgggcaaatc
gaccgtatggatcgcttctccctgcgctatcgcgcgcgcaagttccagagtgaacagtac
cgtatgccgtggagcggcctgcgcggtcagcgtaccagccttattccccaccagctgaac
atcgcccatgacgtgggccgccgtcacgcacctcgcgttctgctggcagatgaagtgggc
ctggggaaaaccattgaagcgggcatgatcctgcatcaacagctgctttccggcgcagcc
gagcgcgtgctgattgtggtaccggaaaccctgcagcatcaatggctggtcgagatgctg
cgccgctttaacctgcgtttcgctctgtttgatgacgagcgctatgcagaagcccagcac
gatgcggacaacccgtttgaaacggaacagctggtgatctgctctctggatttcgtacgc
cgcagcaagcaacgtcttgagcatctgtgcgacgccgaatgggacctgatggtggtcgat
gaagcgcaccatctggtctggagcgaagatgcaccaagccgggaatacatggctatcgaa
cagcttgccgagcgcgtaccaggcgtcctgctgctgaccgcaacgccggagcagttaggt
ctggagagccacttcgcccgtttgcgcctgctcgatccaaaccgcttccatgactttgag
cagttcgttgaagagcagaataactaccgtccggtcgccgatgccgttgccctgctgctg
gcgggtaaacatctctcgaatgacgagctcaacaccctgagcgatctgattggcgagcag
gatattgagcctctgctgcaggcggccaacagcgacagtgacaacgcggattccgcgcgt
aaagaactgatcgatatgctgatggatcgccacggcaccagccgcgtcctgttccgtaac
acccgtaacggggtgaaaggtttcccgaaacgcgaactgcataccatcaaattgccactg
ccgacgcagtaccagacagccattaaagtttccggcattatgggcgcgcgcaaaactgca
gaagagcgtgcacgcgacatgctctacccggaacagatttaccaggaatttgaaggcgat
accggcacctggtggaacttcgacccgcgtgttgagtggctgatgggctatttgaccgcg
caccgttctcagaaagtgctggtgatctgcgccaaagcagccaccgcactgcagctggag
caggtcctgcgcgaacgcgaaggtattcgcgccgccgtgttccacgaagggatgtccatc
gtcgagcgtgaccgtgccgcggcatggtttgcagaagaggacagcggtgcccaggttctg
ctgtgctctgaaatcgggtctgaaggccgtaacttccagtttgccagcaacctggtgatg
ttcgatttgccgttcaacccggatctgctggaacagcgtatcggccgtctggatcgtatt
ggccaggcgcatgatattcagatccacgttccttatctggaaaaaaccgcccagtccgta
ctggtgcgttggttccacgaaggtctggatgcgtttgagcatacctgcccgaccggccgc
ccgatttacgatcaggtgcacgccgatctgatcggctatctggctgcgccagagaacacc
gacgggtttgatgaactgatcaaagcctgccgtgataagcatgaagcgctgaaatctcag
ctggaacagggccgtgaccgcctgctggagatccactccaacggcggtgaaaaagcccag
gcgctcgctgaaagcattgaagagcaggatgatgacaccagcctgatcagcttctccatg
aacctgttcgacatcgttggcataaaccaggacgatcgtggcgagaatttgattgtcctg
accccgtccgaccatatgctggtcccggatttccctggcctgccggaagatggatgcacc
atcacctttgaacgtgatgtggcgctgtcgcgcgaagatgcgcagttcatcacctgggag
cacccgctgatccgcaacggtctggatttgatcctctcaggcgataccggcagcagcacc
atctcgttgttgaaaaacaaagcgctgccagtgggtaccctgctgttggaactgatttac
gttgtcgaagcgcaggcgccgaaacagctgcagctcaaccgcttcctgccgtcaacacct
gtgcgtctgctgctggacaaaaacggcacgaacctcgccgctcaggttgaattcgagagc
tttaaccgccaactgagtgcggtgaaccgccataccggcagtaagctggtcaacgcggta
cagcaggatgtgcacgctattctgcagctgggtgaaatgcagatcgaaaaagcggcccgg
gcgctgattgatgccgcacgtcaagaagccgacgacaaactgtccgcggaactctcccgt
ctggaagcgttgaaagcggtaaacccaaacatccgcgatgacgagctggcagcgatcgag
agcaaccgtcagcaggtgctggaaagccttaatcaggcaggctggcgtctggatgccctg
cgtcttatcgttgtgacgcatcagtaa
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