Enterobacter ludwigii EcWSU1: EcWSU1_01341
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Entry
EcWSU1_01341 CDS
T01652
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase rhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
eec
Enterobacter ludwigii EcWSU1
Pathway
eec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EcWSU1_01341 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eec03019
]
EcWSU1_01341 (rhlE)
Enzymes [BR:
eec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EcWSU1_01341 (rhlE)
Messenger RNA biogenesis [BR:
eec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EcWSU1_01341 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AEW72780
UniProt:
G8LFX1
LinkDB
All DBs
Position
1406342..1407724
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AA seq
460 aa
AA seq
DB search
MSFDSLGLNPEILRAIAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
ELLVKNQPHAKGRRPVRALILTPTRELAAQIGENVREYSRYLNIRSLVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNALKLDSIEILVLDEADRMLDMGFIHDIRRVLAKLPPR
RQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQITQHVHFVDKKRKRELLSHMI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALAEFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLRKEIPRIETPGYDVDPSIKAEPIQNGRQGGGRGQGGGGRSQQPRRSEGGAPKAAGK
PPRRNTEAKPGGESPWRSGEGKPAGEGQRRRRPRKPANPQ
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcccttggcctgaaccctgaaattttgcgcgctatcgcagagcagggc
tacgtcgagccaaccccaatccagcagcaggctattccggccgttctgcagggccgcgac
ctgatggccagcgcccagaccggtaccggtaagaccgcgggttttaccctgccgctgtta
gagctgctggtaaaaaatcagccgcacgccaaaggacgtcgtccggtgcgtgccctgatc
ctcaccccaacgcgtgagctggcggcccagattggtgagaacgtgcgtgagtacagccgc
tatctcaacattcgctcgctggtggttttcggtggagtaagcattaacccgcagatgatg
aagctgcgtggtggcgtggacgtgctggtggcaacgccgggtcgtctgttggatcttgag
caccagaatgccctgaagcttgatagcatcgaaatcctggtgctggacgaagctgaccgc
atgctggatatgggctttatccacgacattcgtcgcgtgctggctaaactgccaccgcgt
cgtcagaacctgctgttctctgccaccttctctgatgagatcaaggcgctggcggaaaaa
ctgctgcataacccgctggaagtggaagtggcgcgtcgcaacaccgcctctgagcaaatt
acccagcacgttcacttcgttgataaaaagcgtaagcgggaactgctctcccatatgatt
ggtcagggcaactggcagcaggtgctggtctttacccgtaccaagcacggcgctaaccat
ctggcggaacagctgaataaagacggtatccgcagcgcggcgatccacggtaacaaaagc
cagggggcacgtacccgcgcgctggctgaatttaaatccggtgacattcgcgtcctggtt
gccaccgacattgctgcccgtggtctggatattgaagagctgccgcacgtcgtaaactac
gagctgccaaacgtaccggaagactatgttcaccgtatcggtcgtaccggtcgtgcggcg
gcaaccggtgaagcgctttcgctggtgtgtgtggatgaacacaaactgctgcgtgatatc
gaacgtctgctgagaaaagagatcccgcgtatcgaaaccccgggctatgacgtggacccg
tccatcaaggcggagcctattcagaatggccgtcagggcggtggtcgtggtcagggtggc
ggggggcgcagtcagcagccgcgtcgttctgaaggcggtgcaccgaaagccgcgggcaaa
cctccgcgtcgtaatacagaggctaagccaggcggtgaaagcccatggcgtagcggcgag
gggaaaccggcaggggaagggcagcgccgacgccgcccgcgtaaacctgctaacccgcag
taa
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