Enterobacter ludwigii EcWSU1: EcWSU1_02728
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Entry
EcWSU1_02728 CDS
T01652
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
eec
Enterobacter ludwigii EcWSU1
Brite
KEGG Orthology (KO) [BR:
eec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eec03016
]
EcWSU1_02728 (rnd)
Enzymes [BR:
eec01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EcWSU1_02728 (rnd)
Transfer RNA biogenesis [BR:
eec03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EcWSU1_02728 (rnd)
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AEW74160
UniProt:
G8LG68
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All DBs
Position
complement(2823889..2825043)
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AA seq
384 aa
AA seq
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MGANKRESVLNYQMITTNDELALLCEVTRDFPAIALDTEFVRTRTYYPQLGLIQMYDGKH
VSLIDPLGITDWTPMRDLLLDTAVTKYLHAGSEDLEVFLNTFGVMPQPLIDTQILAAFSN
RPLSWGFAAMVEEYTGLTLDKSESRTDWLARPLTERQLEYAAADVFYLLPIAGQLMKEAE
ASGWLPAALDECRMTQQRRQEVVDPKEAWRDISNAWQLRTRQLACLQLLADWRLRKARER
DLAVNFVVREEHLWAVARYMPGSMGELDSIGLSGSEIRFHGKTLLALVAKAQEMPDEALP
EPLLNLMDMPGYRKAFKDIKALVQDVATQSKLGAELLASRRQINQLLNWHWKLKPQNGLP
EMMAGWRGELMADRLNTVLEGYPR
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcaaacaaaagagaatccgttttgaattaccagatgatcacgaccaacgacgag
ctggctttgctgtgcgaagtgacgcgcgactttcctgccattgccctggataccgagttt
gtccgcacccggacctactatccgcagctggggttgattcagatgtacgacggtaaacac
gtgtcgctgatcgacccgctcggcattaccgactggacgccgatgcgtgacctgctgctc
gatactgcggtaacgaaatacctgcacgcaggcagtgaagatctggaagtctttctgaat
acttttggcgtcatgccacaaccgttgattgatacacagatcctcgcggccttcagtaat
cgaccgctctcatggggctttgccgccatggttgaggagtatacgggcctgacgctggat
aaaagcgaatcccgcaccgactggctggcacgcccattaaccgagcgtcaactggaatac
gcggcggcagacgtgttttacctcctgccgattgccggccaactgatgaaagaggcggaa
gcgtcaggctggttgcccgccgcgctggatgagtgccgaatgacgcagcagcgtcgtcag
gaagtggttgatccgaaagaggcctggcgcgatatcagtaacgcctggcagctgcgtacg
cgtcagctggcgtgtctgcagctgttagcggactggcgtttgcgtaaagcacgcgagcgc
gatctggccgttaactttgtggtacgcgaagaacacctctgggcggtcgcgcggtatatg
ccgggcagcatgggcgaactggacagcatcgggctttccggcagcgagatccgtttccac
ggtaaaaccctgcttgcgctggtggcaaaagcgcaggaaatgccggacgaagcactgccg
gagccactgctgaatctgatggatatgccgggctatcgcaaggcgttcaaggatatcaaa
gcgctggtgcaggacgtcgcgacgcaaagcaaactgggcgcggaactgctggcgtcacgc
cgtcagattaaccagctgctgaactggcactggaagctgaaacctcagaatggtttgccg
gaaatgatggcgggctggcgcggggaattgatggccgatcgcctgaatacggtgctggaa
ggttatccgcgataa
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