Enterobacter ludwigii EcWSU1: EcWSU1_03390
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Entry
EcWSU1_03390 CDS
T01652
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase srmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
eec
Enterobacter ludwigii EcWSU1
Brite
KEGG Orthology (KO) [BR:
eec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eec03009
]
EcWSU1_03390 (srmB)
Enzymes [BR:
eec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EcWSU1_03390 (srmB)
Ribosome biogenesis [BR:
eec03009
]
Prokaryotic type
rRNA helicases
EcWSU1_03390 (srmB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
DUF561
AAA_11
AAA_22
Shikimate_DH
CMS1
Motif
Other DBs
NCBI-ProteinID:
AEW74818
UniProt:
G8LNC8
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All DBs
Position
3536675..3538003
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AA seq
442 aa
AA seq
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MTVTTFSELELDESLLNALESKGFTRPTAIQAAAIPPALEGRDVLGSAPTGTGKTAAYLL
PVLQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAVNTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RNQTMLFSATLEGDAIKDFAERLLEDPVEVSATPSTRERKKIHQWYYRADNLEHKVELLK
HLLKQDDATRTIVFVRKRERVHELAEMLRNAGINNCYLEGEMAQVKRTEGIKRLTDGRVN
VLVATDVAARGIDIPDVSHVINFDMPRSGDTYLHRIGRTGRAGRKGIAISLVEAHDYLLL
QKIGRYVDEPLKARVIDELRPTTRAPSEKMTGKPSKKALAKRAEKKEKEKEKPRVKQRHR
DTKNIGKRRKPSSAAPETKTEE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgatgaaagcctgctcaatgcacttgag
agcaaaggctttacacgcccgaccgccattcaggcagcggccattccgcctgcgcttgag
ggccgcgatgtgctcggttctgcgccaaccggcacggggaagacagcagcttacttgctg
cctgtgttgcagcatctgctcgattttccacgtaaaaaatcaggcccgccgcgtattttg
atcctgacgccgacgcgcgagctggcgatgcaggttgccgatcacgcccgcgagctggcg
gtcaatacccatctggatatcgccacgatcactggcggcgttgcgtatatgaaccacgcc
gaagtgtttagcgaaaaccaggacatcgtcgttgcgacgaccggtcgcctgctgcagtac
attaaagaagagaacttcgactgccgcgcggtagaaacactgattctggatgaagctgac
cgcatgctggacatgggcttcgcgcaggatatcgaacatatcgcgggtgagacacgctgg
cgtaaccagacgatgctgttctctgccacccttgaaggggacgcgatcaaagacttcgca
gagcgcctgctggaagatccggtggaagtttccgcgacgccgtccacgcgcgagcgcaag
aagatccaccagtggtattaccgtgcagataaccttgaacacaaggttgagttacttaag
cacctgctgaagcaggacgatgccacccgtaccatcgtctttgtgcgtaagcgcgagcgt
gtgcatgaactggctgaaatgctgcgtaatgccggaatcaataactgctatctcgaaggc
gagatggcgcaggttaagcgtaccgaagggattaaacgtctgactgatggtcgcgtgaac
gtgctggtcgcaacagacgttgctgcacgcgggatcgacattccggacgtcagtcacgtc
attaacttcgatatgccacgcagcggcgacacctatctgcaccgcattggccgtaccggc
cgtgccggacgcaaaggtatcgcgatctctctggtcgaagcgcatgactacctgctgctg
cagaaaattggccgctacgttgatgagccactgaaagcacgcgttattgatgagcttcgc
ccgaccacacgtgcaccgagtgaaaaaatgacgggcaaaccgtctaaaaaagcgctcgca
aaacgtgctgagaaaaaagagaaagaaaaagagaagccgcgcgtgaagcagcgccaccgc
gataccaagaatattggtaaacgccgtaaaccaagctctgccgcaccagagacgaaaact
gaagagtaa
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