Electrophorus electricus (electric eel): 113568689
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Entry
113568689 CDS
T05787
Symbol
ptbp1
Name
(RefSeq) LOW QUALITY PROTEIN: polypyrimidine tract-binding protein 1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
eee
Electrophorus electricus (electric eel)
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eee03019
]
113568689 (ptbp1)
03041 Spliceosome [BR:
eee03041
]
113568689 (ptbp1)
Messenger RNA biogenesis [BR:
eee03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
113568689 (ptbp1)
Spliceosome [BR:
eee03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113568689 (ptbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
113568689
NCBI-ProteinID:
XP_026852674
UniProt:
A0AAY5ECG0
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MDGRLETELYPMGSSYAELDVVHEIAVGTKRGSDELFSCVSNGPYIMSSAANGNDSKKFK
GDIRSPGIPSRVIHVRKLPADINEAEVISLGLPFGKVTNLLMLKGKNQAFLEMNTEEAAQ
TMVSYYSSVTPVIRNHPIFMQYSNHKELKTDNSPNQVRAQAALQAVNAVQTGSMAIAGVD
PTGATGPSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKVITFTKNNQFQALLQFADGIT
AQHAKLALDGQNIYNACCTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTGDGQPALEHHA
MAAAAFATPGIISAAPYASAHAFPPAFAIQQAAGLTMPGVPGALASLAIPGAAAAAAXAA
GRLGFPSLSGGHCVMLVSNLNPERVTPQCLFILFGVYGDVIRVKIMFNKKENALVQMADA
TQAQLAMSHLNGQKLYGRALRITLSKHTTVQLPREGHEDQGLTKDYSNSPLHRFKKPGSK
NYSNIFPPSSTLHLSNIPPSVVEDDLKMLFASSGALVKNFKFFQKDRKMALIQMSSVEEA
IESLIEFHNHDLGENHHLRVSFSKSTI
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggacggccgcctagagactgaattgtatcctatgggatcaagttacgccgaattagat
gttgtccatgaaattgcagttggcacaaagagaggatctgacgagcttttctcctgtgtt
tccaacgggccatatatcatgagttcagcggctaatggcaatgacagcaagaagtttaaa
ggtgacatcagaagccccggtattccgtcccgtgtcatacatgtgcgcaagcttcctgct
gacatcaatgaggcggaggtcatctctctaggccttccctttggcaaagtcaccaacctg
ctcatgctgaaaggaaagaaccaggctttccttgagatgaacacagaggaggcagcccag
actatggtcagttactactcctcagtcacaccagtcatcaggaaccaccccatctttatg
cagtactccaaccacaaggagctgaaaacggacaactctccaaaccaagtgagggcacag
gcagcactgcaggccgtcaacgcagtccagactggcagcatggccattgctggcgtggac
cccactggtgccacaggcccgagccctgtactcagggtcatcgtggagaacctgttctac
ccagtcaccctggatgtcctgcaccagatcttttccaagtttggcactgtgctgaaagtg
ataacctttaccaagaacaaccagttccaagctcttctgcagtttgctgatgggattact
gctcagcatgctaaacttgccctggacggccagaacatctacaatgcctgctgtaccctg
cgcatcagcttctccaagctcaccagcctgaacgtcaagtacaacaacgacaagagccga
gactacacacgccccgacctacccacgggagatgggcagcccgccctggagcatcacgcc
atggcagctgctgccttcgctactcccgggatcatttcggccgcgccgtacgccagtgcc
cacgccttccccccggccttcgccattcagcaggctgcaggcctgaccatgcctggtgtt
cctggagccctggcctctctggccattccgggggccgcagcggcggccgcnnnngccgca
ggcagactgggcttccccagcctctccggaggacactgcgtcatgctggtcagcaacttg
aaccctgagagagttacgccccaatgcctctttattcttttcggtgtatatggtgatgtg
ataagggtgaaaattatgttcaacaaaaaggagaatgccttggttcagatggctgatgcc
acccaggctcagctagccatgagtcatttgaatggacagaagctgtatgggcgggcgctg
cgcatcactttatccaaacacacgactgttcagctgcctcgtgagggccatgaagatcaa
ggcctcaccaaggactacagtaactctccccttcaccgcttcaagaagcctggctccaaa
aactactccaacatcttccctccctcatccacgctacacctctccaacatcccgccttca
gttgttgaagacgatcttaagatgctgtttgccagctctggggcattggtcaagaacttt
aagttttttcagaaagaccgtaagatggccctaattcagatgagttcagtggaagaagca
atcgaatcccttatcgagttccataaccatgatcttggcgagaaccatcatcttcgtgtg
tctttctccaaatccaccatttga
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