KEGG   Electrophorus electricus (electric eel): 113569736
Entry
113569736         CDS       T05787                                 
Symbol
rpa1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
  KO
K07466  replication factor A1
Organism
eee  Electrophorus electricus (electric eel)
Pathway
eee03030  DNA replication
eee03420  Nucleotide excision repair
eee03430  Mismatch repair
eee03440  Homologous recombination
eee03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:eee00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    113569736 (rpa1)
   03420 Nucleotide excision repair
    113569736 (rpa1)
   03430 Mismatch repair
    113569736 (rpa1)
   03440 Homologous recombination
    113569736 (rpa1)
   03460 Fanconi anemia pathway
    113569736 (rpa1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:eee03000]
    113569736 (rpa1)
   03032 DNA replication proteins [BR:eee03032]
    113569736 (rpa1)
   03400 DNA repair and recombination proteins [BR:eee03400]
    113569736 (rpa1)
Transcription factors [BR:eee03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    113569736 (rpa1)
DNA replication proteins [BR:eee03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    113569736 (rpa1)
DNA repair and recombination proteins [BR:eee03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     113569736 (rpa1)
   MMR (mismatch excision repair)
     113569736 (rpa1)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     113569736 (rpa1)
SSDB
Motif
Pfam: Rep_fac-A_C REPA_OB_2 Rep-A_N tRNA_anti-codon DUF5521 Telethonin
Other DBs
NCBI-GeneID: 113569736
NCBI-ProteinID: XP_026853534
LinkDB
Position
Unknown
AA seq 602 aa
MAVKLSEGAIEALTKGNDVTNPVLQLVNIRKIEGGSGPVRFRLMMSDGLHTMSSFMLSTQ
LNSLAEQNLVAPNCVCLLKRSVTNVLKDGRPVVIILDMEVVKPADQVPGKIGDPTPYVEG
QSKAPQSAPSAPAPSARHLQPQNGGGGLASRGTSRDFGKKPMPSTPGGTSKVVPIASLNP
YQSKWTIRARVTNKSSIRTWSNSRGDGKLFSMEIVDESGEIRVTGFNQEVDKFFSLIEQG
KVYYISKGTLKIANKQYTSLKNDYEMTLNGDSTIIPCDDSHDVPMLQCDFVSIGDLEARD
KDAIVDVIGVCKSVEDVTRITTKNSREVSKRNIQLMDMSGRVIQVTMWGTEAETFDGTEQ
PILAIKGAKLSDFGGRSLSTLFSSTVMINPDIPEAYKLRGWYDKEGHALDAQSMTEMRGG
GGGGPTNWKTLADVKNEHLGHGDKADYFTCIGTIVYMRKENCLYQACPSKDCNKKVVDQH
NGMFRCEKCDKEFPDFKYRLMLSVNIADFGDNQWVTCFQDSAETILGQKSDYIGQLKDSN
EAAFDEVFQHANFNTFVFRNRVKLETYNDESRIKVTVVEAKPVDHKEYSKRLIMSIRKAA
VQ
NT seq 1809 nt   +upstreamnt  +downstreamnt
atggctgttaagttgtccgagggcgcgatagaggccctgaccaaaggtaatgatgtcacc
aacccagtccttcaattggttaatattcggaagattgaagggggcagtggaccagtccgc
tttcgactcatgatgagtgacggccttcataccatgtcctctttcatgctctccacacag
ctgaactccctggctgagcaaaacctggtggctcccaactgtgtgtgtttgctgaaaaga
agcgtcaccaatgtccttaaggatgggcggcctgtggtgattatactggacatggaggtc
gttaagcctgctgatcaggtgcctgggaaaataggagacccaactccttatgtagaggga
cagtcaaaggctccacagtctgcaccttcagcccctgcaccctcggctcgacatctgcag
ccccagaatgggggcggcggccttgcgagcagaggcacctctcgtgacttcgggaagaag
cccatgcccagcacaccggggggcacctcgaaagttgtgcctatcgccagcctcaacccc
taccagtcaaagtggaccattcgagcgcgggttactaacaagagttccattcgcacctgg
agcaactctcggggagacgggaagctcttctccatggagatagtggacgagagcggtgag
attagagtgaccggttttaatcaggaggtggataaattcttctcccttatcgaacagggg
aaggtatactacatctccaagggcacgctgaagatcgccaacaaacagtacacgtctctg
aagaacgactacgagatgaccctgaacggcgactctacaatcattccctgtgacgacagc
catgatgtccccatgttgcagtgcgacttcgtctccatcggcgacctggaggccagggat
aaggacgccatcgtggatgtgatcggggtgtgtaagagcgtggaggatgtgactcgcatc
acaactaaaaacagccgtgaggtgtccaagaggaacattcagctgatggacatgtctggc
agagtcatccaggtcaccatgtggggaacagaggcagagacgtttgatggcaccgagcag
cccatcttggcaataaagggtgccaagctgtcagacttcggagggcgttccctctccacc
ctcttcagcagcactgtaatgatcaaccccgacatccccgaggcatacaagctgagaggc
tggtatgataaagagggccatgccctagatgctcagtccatgacagagatgaggggaggt
ggaggtggtggtcccaccaactggaagaccctggcagatgtcaaaaatgagcacctgggc
catggcgacaaggcagattacttcacgtgcatcggcaccattgtgtacatgcggaaggag
aactgcctgtaccaggcttgtcccagtaaagactgcaataagaaggtggtggaccagcac
aacggcatgttccgctgcgagaagtgcgacaaagagttccctgacttcaaatatcgcctc
atgctctccgtaaacattgccgattttggagacaaccagtgggtgacgtgctttcaagac
agcgccgagaccatccttggccaaaaatcagattatattggccaactcaaggactcgaac
gaggctgcctttgacgaggtcttccagcacgccaatttcaacacttttgtcttccgtaac
cgagtgaagttggagacctacaatgatgaatcgcgcatcaaggtgaccgtggtagaggcc
aagcctgtggaccacaaggagtacagcaagaggctcatcatgtccatcaggaaggccgcg
gtgcagtag

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