Electrophorus electricus (electric eel): 113569736
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Entry
113569736 CDS
T05787
Symbol
rpa1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee03030
DNA replication
eee03420
Nucleotide excision repair
eee03430
Mismatch repair
eee03440
Homologous recombination
eee03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113569736 (rpa1)
03420 Nucleotide excision repair
113569736 (rpa1)
03430 Mismatch repair
113569736 (rpa1)
03440 Homologous recombination
113569736 (rpa1)
03460 Fanconi anemia pathway
113569736 (rpa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eee03000
]
113569736 (rpa1)
03032 DNA replication proteins [BR:
eee03032
]
113569736 (rpa1)
03400 DNA repair and recombination proteins [BR:
eee03400
]
113569736 (rpa1)
Transcription factors [BR:
eee03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
113569736 (rpa1)
DNA replication proteins [BR:
eee03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
113569736 (rpa1)
DNA repair and recombination proteins [BR:
eee03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
113569736 (rpa1)
MMR (mismatch excision repair)
113569736 (rpa1)
DSBR (double strand breaks repair)
HR (homologous recombination)
113569736 (rpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF5521
Telethonin
Motif
Other DBs
NCBI-GeneID:
113569736
NCBI-ProteinID:
XP_026853534
LinkDB
All DBs
Position
Unknown
AA seq
602 aa
AA seq
DB search
MAVKLSEGAIEALTKGNDVTNPVLQLVNIRKIEGGSGPVRFRLMMSDGLHTMSSFMLSTQ
LNSLAEQNLVAPNCVCLLKRSVTNVLKDGRPVVIILDMEVVKPADQVPGKIGDPTPYVEG
QSKAPQSAPSAPAPSARHLQPQNGGGGLASRGTSRDFGKKPMPSTPGGTSKVVPIASLNP
YQSKWTIRARVTNKSSIRTWSNSRGDGKLFSMEIVDESGEIRVTGFNQEVDKFFSLIEQG
KVYYISKGTLKIANKQYTSLKNDYEMTLNGDSTIIPCDDSHDVPMLQCDFVSIGDLEARD
KDAIVDVIGVCKSVEDVTRITTKNSREVSKRNIQLMDMSGRVIQVTMWGTEAETFDGTEQ
PILAIKGAKLSDFGGRSLSTLFSSTVMINPDIPEAYKLRGWYDKEGHALDAQSMTEMRGG
GGGGPTNWKTLADVKNEHLGHGDKADYFTCIGTIVYMRKENCLYQACPSKDCNKKVVDQH
NGMFRCEKCDKEFPDFKYRLMLSVNIADFGDNQWVTCFQDSAETILGQKSDYIGQLKDSN
EAAFDEVFQHANFNTFVFRNRVKLETYNDESRIKVTVVEAKPVDHKEYSKRLIMSIRKAA
VQ
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggctgttaagttgtccgagggcgcgatagaggccctgaccaaaggtaatgatgtcacc
aacccagtccttcaattggttaatattcggaagattgaagggggcagtggaccagtccgc
tttcgactcatgatgagtgacggccttcataccatgtcctctttcatgctctccacacag
ctgaactccctggctgagcaaaacctggtggctcccaactgtgtgtgtttgctgaaaaga
agcgtcaccaatgtccttaaggatgggcggcctgtggtgattatactggacatggaggtc
gttaagcctgctgatcaggtgcctgggaaaataggagacccaactccttatgtagaggga
cagtcaaaggctccacagtctgcaccttcagcccctgcaccctcggctcgacatctgcag
ccccagaatgggggcggcggccttgcgagcagaggcacctctcgtgacttcgggaagaag
cccatgcccagcacaccggggggcacctcgaaagttgtgcctatcgccagcctcaacccc
taccagtcaaagtggaccattcgagcgcgggttactaacaagagttccattcgcacctgg
agcaactctcggggagacgggaagctcttctccatggagatagtggacgagagcggtgag
attagagtgaccggttttaatcaggaggtggataaattcttctcccttatcgaacagggg
aaggtatactacatctccaagggcacgctgaagatcgccaacaaacagtacacgtctctg
aagaacgactacgagatgaccctgaacggcgactctacaatcattccctgtgacgacagc
catgatgtccccatgttgcagtgcgacttcgtctccatcggcgacctggaggccagggat
aaggacgccatcgtggatgtgatcggggtgtgtaagagcgtggaggatgtgactcgcatc
acaactaaaaacagccgtgaggtgtccaagaggaacattcagctgatggacatgtctggc
agagtcatccaggtcaccatgtggggaacagaggcagagacgtttgatggcaccgagcag
cccatcttggcaataaagggtgccaagctgtcagacttcggagggcgttccctctccacc
ctcttcagcagcactgtaatgatcaaccccgacatccccgaggcatacaagctgagaggc
tggtatgataaagagggccatgccctagatgctcagtccatgacagagatgaggggaggt
ggaggtggtggtcccaccaactggaagaccctggcagatgtcaaaaatgagcacctgggc
catggcgacaaggcagattacttcacgtgcatcggcaccattgtgtacatgcggaaggag
aactgcctgtaccaggcttgtcccagtaaagactgcaataagaaggtggtggaccagcac
aacggcatgttccgctgcgagaagtgcgacaaagagttccctgacttcaaatatcgcctc
atgctctccgtaaacattgccgattttggagacaaccagtgggtgacgtgctttcaagac
agcgccgagaccatccttggccaaaaatcagattatattggccaactcaaggactcgaac
gaggctgcctttgacgaggtcttccagcacgccaatttcaacacttttgtcttccgtaac
cgagtgaagttggagacctacaatgatgaatcgcgcatcaaggtgaccgtggtagaggcc
aagcctgtggaccacaaggagtacagcaagaggctcatcatgtccatcaggaaggccgcg
gtgcagtag
DBGET
integrated database retrieval system